Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1975 ATGGAGTCTTGGAGATACGGCTCTGGAGATAAGGTTTTTGCGCCCAATAATACACTTCCTCCTCCTAATACGTTTGCGAGAAGCACAAATTCCTTCCTGGGTTGGGAATTGAAAGCCCAACCTAATTTTCCCAACGACATTTTGGCCTCGGCTCAACAACATTTACAGGGTCAAGTTTATGAGGAAATGGGATTTCCAGAAATGTTGGGTAAACTGTTGTCTAATGATCCGCTTGGCTGCATTATGAATGATCCAAATTCATTTTCTGAAGGCGAAGACTCTGCTTCGAAGCTCTCAAACTCTGTGGTTGAATCTAACAGCCGGGATTCCCTCGTTGATTTGAAGTTAGGACGAGTTGGTGATGAAAGAGATGCCAATGAATCGCCATTTCCCCAAGGTATTCCTCTTTTGTGTTCTTCAGAGTCATCTACTGTCCGCAAGAGATCGAGAACATCCGCTGTTCAGTCACAAACTGCTTACTGCCAAGCATATGGCTGCAACAAGAATCTAAGCGCCTCTAAAGACTACCACAAGAGGCATAAAGTTTGTGAGGTTCACTCCAAGACTGCTAAAGTCTTAGTGAATGGCATAGAGCAAAGGTTTTGTCAACAGTGTAGCAGGTTTCATTTGCTGGCTGAATTTGATGATGCTAAGCGCAGCTGTCGCAAACGCCTTGCAGGCCATAATGAGCGTCGTAGAAAGCCACAAATGGGTACTCACTTCGGAAAGGGCAGGAGGTTGCTCCAGCCATATAATGATAGCAGATTCCAGGGTAGCATGCTAACATCAGCATCTTTTATCTGCCAAGAGATACTCCCTAATGATGGCATTCTGTATTCTGACAAGTATGGCGCTAATAACTGGTGGAAACCTATGAAGGTCCAAGGTGGGAATGATTTAAGGCATATCTCTGCTATTCCTCTCACAAATGGGCATTCTCAATCAAGACCTCTGCTTCCTTCATGTGTTGAAAAGCAATATCTACTTCTGAATGAAACTGGTGCTATATCCACTACAGGAAGCATATTCTGTGAGAACAACAGTCTGTATCCACCTTCTCTTGGAAATACTTATTCGGGGCCACGATCATCCTACGAAGACACCTTTTTAGGAAGTGAAGACTTTAATGTTTTTGATACAGCATCAACCATGCAGGGATTATCGGGACTTACAGACTCAGGTCGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCATCCAGCCATTCTTCAGCAATTCCCATAGGTCGCCCCATGGTTACTTCGAGCAGCCATGGCAACTACAGCCTGAGTCATGTGTCTGAAAAGATCATGGGAATAAGCTCTCAGGCTTCTACGGGTGGGTTGTCAGCATCAGGTGGTTTTCCATCAGAAATAAATCATCATGATGGAGGTCGCTTTGGCCCTTTGGTGATATTAGACAATAATGACATTGTCAACTTAGAAATCGCAGATGGTATTTTTCAAGGGTCAGAGGTTGTGAATATGAAAGCCCGTGAAGATGGCCCCACTATTGACTTGCTTCAACTGTCATCACAACTTCATCGAGTTGAGCATCAACGGCAGTCCTTGCAGGTGAAGCCAGAAAATGATTCGTTTTGCTCCCTCCGTATTACTTAG 1623 0.4436 MESWRYGSGDKVFAPNNTLPPPNTFARSTNSFLGWELKAQPNFPNDILASAQQHLQGQVYEEMGFPEMLGKLLSNDPLGCIMNDPNSFSEGEDSASKLSNSVVESNSRDSLVDLKLGRVGDERDANESPFPQGIPLLCSSESSTVRKRSRTSAVQSQTAYCQAYGCNKNLSASKDYHKRHKVCEVHSKTAKVLVNGIEQRFCQQCSRFHLLAEFDDAKRSCRKRLAGHNERRRKPQMGTHFGKGRRLLQPYNDSRFQGSMLTSASFICQEILPNDGILYSDKYGANNWWKPMKVQGGNDLRHISAIPLTNGHSQSRPLLPSCVEKQYLLLNETGAISTTGSIFCENNSLYPPSLGNTYSGPRSSYEDTFLGSEDFNVFDTASTMQGLSGLTDSGRALSLLSSQSQNSSSHSSAIPIGRPMVTSSSHGNYSLSHVSEKIMGISSQASTGGLSASGGFPSEINHHDGGRFGPLVILDNNDIVNLEIADGIFQGSEVVNMKAREDGPTIDLLQLSSQLHRVEHQRQSLQVKPENDSFCSLRIT 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1975 540 SUPERFAMILY SBT domain 159 239 IPR036893 GO:0003677|GO:0005634
Lele21g1975 540 Pfam SBP domain 161 234 IPR004333 GO:0003677
Lele21g1975 540 Gene3D - 151 222 IPR036893 GO:0003677|GO:0005634
Lele21g1975 540 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 84 527 IPR044817 GO:0003677
Lele21g1975 540 MobiDBLite consensus disorder prediction 1 21 - -
Lele21g1975 540 Coils Coil 508 528 - -
Lele21g1975 540 FunFam Squamosa promoter-binding-like protein 14 152 222 - -
Lele21g1975 540 ProSiteProfiles Zinc finger SBP-type profile. 158 235 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1975 Lele-ChrLele21 26727241 26730757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1975 1 279 SBP-box Gene Family AT1G69170 40.143 6.37e-46 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele21g1975 SBP 2.5e-30 No_clan