Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1974 ATGAGTATGTTACTGTCTTTCCTATTTTTAACATATGTTGAAACCTTCCATTTCGAGCAGGCAGTGGTTACAATGTACAACTTTCAACAGTACCGGCACATTCAGGCTCCTGGGTGGACATTGGGATGGACATGGGCCAAAAAGGAAGTGATTTGGAACATGATGGGAAGCCAAACGACCGAGCAAGGTGACTGCTCAAAGTTCAAAGGGAATCCCCCGCATTGCTGCAAGAGGGATCCAACGGTGGTGGATCTACTTCCTGGAACTCCGTACAATCAGCAGATTGCAAATTGCTGCAAAGGGGGAGTATTGAACTCATGGGCTCAGGACCAAGCCACAGCAATAAGTTCATTTCAGGTCAGTGTTGGCCTTGCTGGAACAACCAACAAAACTGTCAAGTTGCCTAGAAATTTCACCCTTAAAGCACCGGGGCCTGGATACACTTGCGGTCCTGCAAAGATTGTGAAACCAACCAAGTTTACAACTAATGACAAAAGGAGAACCACTCAAGCATTAATGACCTGGAATGTTACCTGCACATATTCTCAGTTCCTTGCTCAAAAGACCCCAAGTTGCTGTGTTTCTCTTTCATCCTTCTATAATGATACTATAGTGAACTGCCCAACCTGCACATGTGGCTGTCGAAACAAAACAGAACCCGGGAGCTTTGTAGCGTCTTCAGGCAAAGCTAGTAATACACCCCTTGTCCAGTGCACCAGCCATATGTGTCCAATTCGAGTGCATTGGCATGTGAAGGTCAATTATAAAGAGTACTGGAGAGTGAAGATCACAGTCACAAATTTCAATTACAGGATGAACTATACACAATGGAACCTTGTTGTGCAGCACCCCAATTTTGACAATCTGACCCAGCTTTTCAGCTTTAATTACAAGCCATTAACGCCTTATGAGGGTTTGAATGATACTGGCATGCTATGGGGATTGCAGTTCTATAACGATTTGCTGGCATCAGCTGGAGAATTTGGGAATGTACAGTCAGAGCTCTTATTTAGAAAGGATGCATCAACCTTCACATTTGACAAGGGTTGGGCTTTTCCCAGGAGAATTTATTTCAATGGAGATAACTGCGTTATGCCTCCTCCTGATGCCTACCCATGGCTGCCAAATGCAACCACAAAACTAAATTTCTCCCTCCTAAGTACAGCCATATCTGCCTTTGTTTCTTTGGGGCTAGGGCTGTTAGTTGCAGACCTTTCGGCACACTGGGCAAGTCGAAGACTCTTCTCGGAGCCACTTATCGATGCAATTGAGGTGAAAGAAGTGGTCACAGTTCGGGAGCACCCGCCCACTGTCGCCTCCTTGGAACTCATTCAAGCAGATGGCGGCGGAGGAGGAGTGGGTGAAGACGCTCCTGTATTTTCATGCCGTGACGTGATTTTGGGTGGCGCATGGACGACCTTCCGGCACAAAGGGCAAGTCTTGTTTGATTGGGCCCACTTACGGATACAGTGGAAGGTGAAAGAAGTGGTCGCAGTTTGGGAGCACCGGCCCTATGTCTCCTTCTTTGAACTCCTCCATGCAGATGGCACACTCCCGCGGCGGAGGGTGACTGTGCTGGGCTGCTTCGGGGGAGTAGGTGACGGTGGGAAGGCTCTTGACAGGCGAAGGATCATCAAGGGGAGAAGGAGGATGGGGGAAGGGAATGTGATCGTGGCCTGA 1680 0.4804 MSMLLSFLFLTYVETFHFEQAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWNMMGSQTTEQGDCSKFKGNPPHCCKRDPTVVDLLPGTPYNQQIANCCKGGVLNSWAQDQATAISSFQVSVGLAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVKPTKFTTNDKRRTTQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVNCPTCTCGCRNKTEPGSFVASSGKASNTPLVQCTSHMCPIRVHWHVKVNYKEYWRVKITVTNFNYRMNYTQWNLVVQHPNFDNLTQLFSFNYKPLTPYEGLNDTGMLWGLQFYNDLLASAGEFGNVQSELLFRKDASTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNATTKLNFSLLSTAISAFVSLGLGLLVADLSAHWASRRLFSEPLIDAIEVKEVVTVREHPPTVASLELIQADGGGGGVGEDAPVFSCRDVILGGAWTTFRHKGQVLFDWAHLRIQWKVKEVVAVWEHRPYVSFFELLHADGTLPRRRVTVLGCFGGVGDGGKALDRRRIIKGRRRMGEGNVIVA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1974 559 Pfam COBRA-like protein 20 182 IPR006918 GO:0010215|GO:0016020
Lele21g1974 559 PANTHER PROTEIN COBRA 20 389 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1974 Lele-ChrLele21 26718368 26724709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1974 21 402 COBRA Gene Family AT3G02210 74.365 0.0 633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele19g0713 19 4137402 4139414 Lele21g1974 21 26718368 26724709 CCT
Lele20g0744 20 14442768 14446879 Lele21g1974 21 26718368 26724709 CCT
Lele21g1974 21 26718368 26724709 Lele21g1974 21 26718368 26724709 ECH
Lele21g1974 21 26718368 26724709 Lele23g0040 23 251589 254497 hybridization
Lele21g1974 21 26718368 26724709 Lele24g1885 24 23626888 23629676 hybridization