Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1967 ATGACTGGAAATTCAAGAAAAGGTTATCAAGGGAAACAAGAGGAAGATGGTAGTAGTGCTCATCATCATCATCAACAACAACACATGATTAGTAACAGTATTGAGAGGTTTTACAGCAAGGTAGGGCCTTCGTCTTCCTCTTCAAGACAATGGTCTGGTCTGAGAAACCCAAGAATCGTGCGAGTGTCAAGGTCTTTTGGAGGCAAAGATAGGCACAGCAAAGTCTGCACCATTAGAGGGCTTAGAGACAGAAGAATCAGGCTTTCTGTGCCCACAGCAATTCAGCTCTATGAGCTTCAAGATAGGCTTGGACTGAACCAACCCAGTAAGGTCATTGATTGGCTCATTGAAGCCACAAAACAAGATATTGATAAGCTCCCACCTCTTCCAATCCCTCTCGGTTTCCCCCAATTTCATCCCCAACACAACCAAACCCTACTTCCTGATCATGAATCCAGTTCTTCCTCTCATCATCATCAGTTTGGAGCTTTCTTTGATGCTAATAATAATAATAGCACTGCTAGTTTCATGGATGCAGTGTCGAGGCTAAAAGGAAAAGAGTTCGATGAAAGAGGCGAGTGGGTGATGAAGGCAAACAATGAAGAAGATGGAATTGGTGGTTCTGCTCAGAATCTTTTCCCATCTGGGAATTCTAATTCTTCTCACTCCTGTTTACCCATGACGTCGTATTACAATAATCCCTTCCATTCCGAGCCTTCAAATTTTCTATCTTTATTTGGAAGCCATGGTGTGTTCCCTAATAGTAGTAATAATAATAATAACAATCACCAGGTAGATCCTGCAGGTCATACTGGCCTGCAGTTTCCATCTTCCTCATCAGCAGCTGTTTCCCAAGTGTTGTTCTGTCCAAGCAATAATTCATCTGCAACAACAACGTCATCACTTTTTGCTACTCCTTATTATGCTCCATATTCCTCAGTGTCACTGGAAACAGACCCAAGAATGCAACAATTGAACCATATTCAATTGATGAGCTCATCCAATTCTCATCTTCATCATCCTCTCCTTCTTCCATCTCTGAAACCCCTTATTCCAACACCGCCTTTTAGTTCCAGGCTTCTTGATTCAAATGATAAGGATGATACCTCTCCTTCTTGA 1119 0.4209 MTGNSRKGYQGKQEEDGSSAHHHHQQQHMISNSIERFYSKVGPSSSSSRQWSGLRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYELQDRLGLNQPSKVIDWLIEATKQDIDKLPPLPIPLGFPQFHPQHNQTLLPDHESSSSSHHHQFGAFFDANNNNSTASFMDAVSRLKGKEFDERGEWVMKANNEEDGIGGSAQNLFPSGNSNSSHSCLPMTSYYNNPFHSEPSNFLSLFGSHGVFPNSSNNNNNNHQVDPAGHTGLQFPSSSSAAVSQVLFCPSNNSSATTTSSLFATPYYAPYSSVSLETDPRMQQLNHIQLMSSSNSHLHHPLLLPSLKPLIPTPPFSSRLLDSNDKDDTSPS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1967 372 MobiDBLite consensus disorder prediction 1 29 - -
Lele21g1967 372 MobiDBLite consensus disorder prediction 254 276 - -
Lele21g1967 372 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 310 IPR005333 GO:0003700
Lele21g1967 372 MobiDBLite consensus disorder prediction 9 23 - -
Lele21g1967 372 Pfam TCP family transcription factor 68 176 IPR017887 -
Lele21g1967 372 ProSiteProfiles TCP domain profile. 68 126 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1967 Lele-ChrLele21 26668820 26669938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1967 52 140 TCP Transcription Factor Family AT5G60970 82.022 1.49e-47 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele21g1967 TCP 3.8e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1967 21 26668820 26669938 Lele24g1878 24 23560481 23561605 hybridization