Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1935 ATGTCTGTTTTGAGGAAATCTCCCCTAAAATTTGTTAAACATGGTTCTGTTGAACCTTTCTATCCTGTTAACTCGGGATCAAATCCATTTGATTCTGATGATGACGAGCCAAAAGCAAAGCAAAAAAATAATTCCTCGAGTAGGTCATCTTCAGACCCTTCCCTAGTTTTACAAGGAGGAAAAACCAATCCCTTTGATGATGATGATGGGGGCCATAGGAACACTTCTTCATCTTCTTATACCATTCGATCGGCAAACCGAAACAAGTATAGGAATGATTTTCGTGACTCAGGAGGAATAGAGAATCAATCAGTGCAAGAATTGGAAAATTATGCTGTTTTCAAGGCTGAAGAGACTACAAAATCAGTCAATAACTGTTTGAAGATAGCAGAGGAGATAAGAGAGGATGCTACCAAGACTTTAGTCACTCTACACCTGCAGGGTGAGCAAATTACCAGGTCTCACAATGTTGCAGTTGACATCGACCATGATCTTAGTCGGGGAGAAAGGCTTTTAGGAAGTCTTGGTGGCATCTTTTCCAAAACTTGGAAACCAAAGAAGACACGACCCATTACAGGGCCTGTTATTGTTGGAGATGATCAGTTCCCAAGAAAGGGCAGCCACTTGGAGCGGAGAGAGAAATTGGGATTGACTTTTGCACCCAGAGGGAAGTCAAACTCTCGAACACCACCTCCTGAGCCAACCAATGCTCTTGAAAAAGTTGAGATTGAAAAGGGGAAACAAGATGACGCATTGTCAGATTTAAGCGATCTGTTGGGAGAGCTGAAAGATATGGCTATTGACATGGGATCTGAAATTAAGAGCCACAACAAAGCGCTTGGCCATATGTACAACGATGTGGACGAGTTGAATTACCGCATAAAAGGGGCTAATCAACGTGGTCACCGTCTACTGGGAAAATAA 924 0.4242 MSVLRKSPLKFVKHGSVEPFYPVNSGSNPFDSDDDEPKAKQKNNSSSRSSSDPSLVLQGGKTNPFDDDDGGHRNTSSSSYTIRSANRNKYRNDFRDSGGIENQSVQELENYAVFKAEETTKSVNNCLKIAEEIREDATKTLVTLHLQGEQITRSHNVAVDIDHDLSRGERLLGSLGGIFSKTWKPKKTRPITGPVIVGDDQFPRKGSHLERREKLGLTFAPRGKSNSRTPPPEPTNALEKVEIEKGKQDDALSDLSDLLGELKDMAIDMGSEIKSHNKALGHMYNDVDELNYRIKGANQRGHRLLGK 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1935 307 MobiDBLite consensus disorder prediction 14 98 - -
Lele21g1935 307 CDD SNARE_Qc 247 303 - -
Lele21g1935 307 Gene3D - 99 176 - -
Lele21g1935 307 Gene3D - 240 306 - -
Lele21g1935 307 MobiDBLite consensus disorder prediction 43 58 - -
Lele21g1935 307 FunFam SNAP25 homologous protein SNAP33 239 306 - -
Lele21g1935 307 SUPERFAMILY SNARE fusion complex 103 173 - -
Lele21g1935 307 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 27 307 - -
Lele21g1935 307 SUPERFAMILY SNARE fusion complex 245 305 - -
Lele21g1935 307 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 242 304 IPR000727 -
Lele21g1935 307 SMART tSNARE_6 108 175 IPR000727 -
Lele21g1935 307 SMART tSNARE_6 237 304 IPR000727 -
Lele21g1935 307 FunFam SNAP25 homologous protein SNAP33 99 176 - -
Lele21g1935 307 CDD SNARE_SNAP25N_23N_29N_SEC9N 110 174 IPR044766 GO:0005484|GO:0031201
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1935 Lele-ChrLele21 26487214 26489097 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1935 21 26487214 26489097 Lele21g1935 21 26487214 26489097 ECH
Lele21g1935 21 26487214 26489097 Lele23g0076 23 505436 507336 hybridization
Lele21g1935 21 26487214 26489097 Lele24g1852 24 23388017 23393191 hybridization