Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1929 ATGTCAGAGCAGAAAACATGGTCATGGGGCTTCATGTTCGTCTTTTTCTTAATCCTTTTTTCAGGTAAAATTGTTGGGCAAGATATTTTGGACACAGAGAGACAAATTCTGCTGGACCTGAGAACTTATCTGGACAATCAAACTCGAACAGATCGAGGAAGATACATACTCTGGAACACAAACAGCTCAAATCCGTGCGCGTGGCCAGGAATCTCATGCAGCCCTACAGGGACAACCTCGGAGGCGAGGGTGGTCGGCATAGACCTTTCCGACAGCAGCATCGCCGGCGAGATTTTCCAGAATTTCTCGCAGCTTACAGAGCTCACTCACCTTGATCTTTCCACAAACACCATCAGCGGAGAAATCCCAGAGGAACTAAGGCGATGCAGAAACCTCGTATATGTCAATCTCTCCCATAATCTTCTCGAGGGGGAGATGGATTTAACTGGATTAACAAGGTTAGAGACGCTGGACTTGTCGGAAAACAGGCTTCATGGGGATATAGGGTTGAATTTTCCTGCCATTTGTGACAACTTAGTTACTTTGAATGTTTCTGGGAATAACTTCACTGGTTCGATTGATCATTGTTTCGATCAGTGTTTAAAACTGCAGTATTTGGATTTGAGCACTAACAATCTCAGTGGGGGTATTTGGACGGGATTTGCGAGGCTGAAGGAGTTCTCAGTTTCAGAGAACTATCTCACTGGGCCTCTGAATGAACAAGCATTCCCAGAAAATTGTAACCTCGAAGTACTCGACGTTTCATTCAATGGTTTTACAGGAAATGCACCGAAGAATGTCAGTAAATGTAAGCATCTAGCGATTCTGAATCTTTCAAGTAACAAATTTTCTGGGGATATCCCCGTTGAATTGGGATCCATCTCAGCCCTCCAAGCATTGTACTTCGCCAACAACACATTCTCAAGAAGCATCCCAGAGGCATTTTCAAAGTTGACAAATCTAAAGTTCTTGGATTTGAGCGGAAACGGTTTTGGTGGAGAGATACAAGACACACTTGGGAAGCTCAAGCAGGTAAAATTCCTCCTTTTGTATTCAAATGATTACACAGGAGGATTAAACTCATCAGGGATTCTCAAATTACCCAACATCTCTCGCTTAGACCTTAGTAACAACAGTTTTTCAGGTCCTTTACCGATTGAAATCTCTCAGTTGACTTCTCTGAAGTTCTTAATGTTGGCCTATAATCAATTCGCCGGAGTTATTCCTCCTGAGTTTGGAAATTTGCCTCAGCTTCAAGCACTTGATATCTCTTTCAACAATTTAACAGGGCAAATCCCACCAACCCTGGGAAACTTGGGTTCTCTCTTATGGTTAATGCTTGCAAACAATTCATTGACCGGAGAAATCCCGAAAGAGCTGGGAAACTGCACAAGCTTGCTGTGGCTAAACCTTGAAAACAATGATCTTACTGGGAATTTCCCTCCTGAATTGACCAACATTGGAAGAAACGCCATGGCCACGTTTGAATTGAATCGGAATGAAGTCAATAGAATCCCTGCTGGTTTTGAATGTTTGGCAATGAAGAGATGGATACCTGCAGATTACCCTCCTTTCAGCTTTGTGTATAGCATCCTCACAAGGAAAAATTGCATAAGCATTTGGGATAGATTACTCAAAGGGTATGGAATTTTCCCGATTTGCTCGTCTGGGTCATCTTTTCGATTAAAGGAGATTTCTGGGTATGTTCAGTTGAGCGGGAATAATCTAATCGGAGAAGTTCCTTCAGAAATTGGAAACATGCAAAATTTCAGCATGCTGCACTTGGGGTTGAACAAACTTTCCGGAAAAATCCCTGCGGTGATGGGAAATCTGCCACTTGTTGTGTTGAACATATCGAGAAACAATTTCTCAGGTGAGATTCCATGGGACATGGGAAACCTTCAATGTCTTCGGAATCTGGATTTGTCCTACAACAATTTCTCTGGGACATTCCCGACAAGCTTGAACAACTTGACAGAGCTCAGTAAATTCAACATCTCTTACAATCCCTTTATTTCTGGTACAATCCCACCAACAGGACAATTAGCCACATTCGATGAGGATTCGTATTTGGGAGACCCACTCTTGACCCTACCAAGCTTCATCAATAACGTCCCAGACAACATAAAAAACACGACCTCTCGTAGAGACCACAAAATCAGAAACAAAAACCCCACGAAACTGTCAATGTTCTTGGCGTTTCTAGCTGTCACACTCGCTCTGTTAGTATTCGGGCTCCTCTCTTTCATAGTATGTTCATTAGCGAAAACCCGTTCACAACACGACCCAGAAGGATACCTATTGGAAGACACAAAAGACCAACAGAACTCCGACAATTCGTCAAATTGGTCGTATGACCTAATTAAGGTTATCCATTTGAACAAGATAGCATTCACGCACGCCGACATTCTCAAAGCCACAGGAAACTTCTCGGACAACAGAGTCATAGGAAAGGGCGGGTTTGGCACCGTGTACAGAGGAGTATTCCCCGACGGAATAGAAGTCGCGGTGAAGAAGCTTCAAAGAGAAGGCCTCGAAGGAGAAAGAGAGTTCAGAGCAGAAATGGAGGTTCTAAGTGGAAACGGTTTCGGGTGGCCACACCCGAATTTAGTCACACTATACGGGTGGTGCCTAAATGGGTCGGAGAAAATCCTAGTTTACGAATACATGGAAGGAGGAAGCTTGGAAGATGTTGTTACAGACAGAACAAGACTCACTTGGAAGAGAAGGTTAGAGATCGCCATTGACGTGGCTCGAGCATTGGTCTATTTGCACCATGAATGCTTCCCTCCAATTGTTCACAGAGACGTTAAGGCAAGCAACGTGCTCTTGGATAAACATGGGAAGGCTAAAGTCACAGACTTCGGGCTAGCAAGAGTGGTAGAAAATGGAGTGAGTCACGTGACCACCATGGTCGCCGGGACGGTGGGCTACGTGGCACCGGAATATGGTCAGACCTGGAAGGCGACAACGAAAGGTGATGTGTACAGCTTTGGAGTGTTGGCTATGGAGTTAGCCACCGGAAGGAGAGCGGTGGATGGTGGTGAGGAGTGCCTGTTGGAGTGGGCTCGACGAGTCACGGGCTATGGATATGGGTTTGGTCCTGGGCTAAGTCGGCCCATGATACCAGTCTTGTTGATGGGCTCTGGTCTGGGAGAGGGAGCGGAGGAGATGGGTGAGTTGTTACGGATTGGGATAAAGTGCACGGCGGAGGCACCACAAGCTAGGCCCAATATGAAGGAGGTTTTGTCGATGCTCATTAACATATTGAACCCAAAGGGGATCGAAATATGGGTGGTGGTGAGAAGTAGCAAAGAACAATACCCTTGGAGATTGCAATTCAGAAGGAGCTTACACATCGGAAGAAGACTAGCCATGCATTTGTATCTAGTTACTTCATCATCAATTCAAACTCTCCAGCAATCGCCATTATCAATCCTTCTAAGTTCAAGTCCGAGCCTTTCAGGAACCAAGGGAAAAGTACTAATCAATCCACGTGATCTATCACTGGCATGTCAGAACCTACACAAGTTATACTGCAAAATCTGCAAATTGTCGTGCTCAAGTCCCTTCAATCTAACACAACATTTGATGGGTCGAAAGCAAAAGTCAAAGCTAAAAGAGCAAGATTTGGGACATAATCAGAAGAATGGGATGGAGGGGACAAACAATCAAATGCGATGGTGTGAACTGTGTGAAGTTCCATGTATGACGGAAGACTTGCTCAATCAGCACTTTAAGGGTAAAAAGCATAGGGTTGAACTACAGAAGTTTGAAATGAGCAAGGAAAAAGGTGGAGAGACCTCGAGTCAGAGAAAATGGTGTGAGCTAAGCAAAATATGGTGCATTGATAGGTCTGCATTCAAGCAGCATCTTGAAGGCAAAAAGCACATGTTCCAAATGCATATTATGGAGAAAAAGTGGCAAGCTGATGAGATGGTGAATGAGATGGCAAATGAGGCCAGAAATATGGAGCAAGCACAAGAAGTCTTGGGGAGGAGTTCCAGAGTACAGGAGAAGCCATTCAAGTTGAGAGATTAA 4041 0.4449 MSEQKTWSWGFMFVFFLILFSGKIVGQDILDTERQILLDLRTYLDNQTRTDRGRYILWNTNSSNPCAWPGISCSPTGTTSEARVVGIDLSDSSIAGEIFQNFSQLTELTHLDLSTNTISGEIPEELRRCRNLVYVNLSHNLLEGEMDLTGLTRLETLDLSENRLHGDIGLNFPAICDNLVTLNVSGNNFTGSIDHCFDQCLKLQYLDLSTNNLSGGIWTGFARLKEFSVSENYLTGPLNEQAFPENCNLEVLDVSFNGFTGNAPKNVSKCKHLAILNLSSNKFSGDIPVELGSISALQALYFANNTFSRSIPEAFSKLTNLKFLDLSGNGFGGEIQDTLGKLKQVKFLLLYSNDYTGGLNSSGILKLPNISRLDLSNNSFSGPLPIEISQLTSLKFLMLAYNQFAGVIPPEFGNLPQLQALDISFNNLTGQIPPTLGNLGSLLWLMLANNSLTGEIPKELGNCTSLLWLNLENNDLTGNFPPELTNIGRNAMATFELNRNEVNRIPAGFECLAMKRWIPADYPPFSFVYSILTRKNCISIWDRLLKGYGIFPICSSGSSFRLKEISGYVQLSGNNLIGEVPSEIGNMQNFSMLHLGLNKLSGKIPAVMGNLPLVVLNISRNNFSGEIPWDMGNLQCLRNLDLSYNNFSGTFPTSLNNLTELSKFNISYNPFISGTIPPTGQLATFDEDSYLGDPLLTLPSFINNVPDNIKNTTSRRDHKIRNKNPTKLSMFLAFLAVTLALLVFGLLSFIVCSLAKTRSQHDPEGYLLEDTKDQQNSDNSSNWSYDLIKVIHLNKIAFTHADILKATGNFSDNRVIGKGGFGTVYRGVFPDGIEVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLNGSEKILVYEYMEGGSLEDVVTDRTRLTWKRRLEIAIDVARALVYLHHECFPPIVHRDVKASNVLLDKHGKAKVTDFGLARVVENGVSHVTTMVAGTVGYVAPEYGQTWKATTKGDVYSFGVLAMELATGRRAVDGGEECLLEWARRVTGYGYGFGPGLSRPMIPVLLMGSGLGEGAEEMGELLRIGIKCTAEAPQARPNMKEVLSMLINILNPKGIEIWVVVRSSKEQYPWRLQFRRSLHIGRRLAMHLYLVTSSSIQTLQQSPLSILLSSSPSLSGTKGKVLINPRDLSLACQNLHKLYCKICKLSCSSPFNLTQHLMGRKQKSKLKEQDLGHNQKNGMEGTNNQMRWCELCEVPCMTEDLLNQHFKGKKHRVELQKFEMSKEKGGETSSQRKWCELSKIWCIDRSAFKQHLEGKKHMFQMHIMEKKWQADEMVNEMANEARNMEQAQEVLGRSSRVQEKPFKLRD 1346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1929 1346 FunFam Calmodulin-binding receptor kinase CaMRLK 222 337 - -
Lele21g1929 1346 Pfam Protein kinase domain 811 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1929 1346 SUPERFAMILY L domain-like 568 1196 - -
Lele21g1929 1346 SMART ZnF_U1_5 1175 1209 IPR003604 GO:0003676|GO:0008270
Lele21g1929 1346 SMART ZnF_U1_5 1224 1258 IPR003604 GO:0003676|GO:0008270
Lele21g1929 1346 SMART ZnF_U1_5 1270 1304 IPR003604 GO:0003676|GO:0008270
Lele21g1929 1346 SMART serkin_6 810 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1929 1346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 932 944 IPR008271 GO:0004672|GO:0006468
Lele21g1929 1346 Gene3D Ribonuclease Inhibitor 314 406 IPR032675 -
Lele21g1929 1346 Gene3D Transferase(Phosphotransferase) domain 1 890 1098 - -
Lele21g1929 1346 FunFam Putative LRR receptor-like serine/threonine-protein kinase 342 503 - -
Lele21g1929 1346 SUPERFAMILY L domain-like 242 488 - -
Lele21g1929 1346 Gene3D Ribonuclease Inhibitor 553 713 IPR032675 -
Lele21g1929 1346 SUPERFAMILY Protein kinase-like (PK-like) 783 1086 IPR011009 -
Lele21g1929 1346 SMART LRR_typ_2 105 129 IPR003591 -
Lele21g1929 1346 SMART LRR_typ_2 415 438 IPR003591 -
Lele21g1929 1346 SMART LRR_typ_2 391 414 IPR003591 -
Lele21g1929 1346 SMART LRR_typ_2 151 171 IPR003591 -
Lele21g1929 1346 SMART LRR_typ_2 634 658 IPR003591 -
Lele21g1929 1346 SMART LRR_typ_2 439 463 IPR003591 -
Lele21g1929 1346 SMART LRR_typ_2 318 342 IPR003591 -
Lele21g1929 1346 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 224 1087 - -
Lele21g1929 1346 CDD STKc_IRAK 816 1089 - -
Lele21g1929 1346 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Lele21g1929 1346 PRINTS Leucine-rich repeat signature 108 121 - -
Lele21g1929 1346 PRINTS Leucine-rich repeat signature 151 164 - -
Lele21g1929 1346 Gene3D Ribonuclease Inhibitor 244 313 IPR032675 -
Lele21g1929 1346 FunFam Leucine-rich repeat receptor protein kinase MSP1 772 889 - -
Lele21g1929 1346 MobiDBLite consensus disorder prediction 1325 1346 - -
Lele21g1929 1346 Pfam Leucine rich repeat 416 476 IPR001611 GO:0005515
Lele21g1929 1346 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Lele21g1929 1346 Pfam Leucine rich repeat 272 330 IPR001611 GO:0005515
Lele21g1929 1346 Pfam Zinc-finger of C2H2 type 1279 1297 - -
Lele21g1929 1346 Pfam Zinc-finger of C2H2 type 1178 1201 - -
Lele21g1929 1346 Pfam Zinc-finger of C2H2 type 1228 1251 - -
Lele21g1929 1346 Gene3D Classic Zinc Finger 1214 1254 - -
Lele21g1929 1346 Gene3D Classic Zinc Finger 1255 1302 - -
Lele21g1929 1346 Gene3D Ribonuclease Inhibitor 175 243 IPR032675 -
Lele21g1929 1346 Gene3D Classic Zinc Finger 1172 1213 - -
Lele21g1929 1346 Coils Coil 1310 1330 - -
Lele21g1929 1346 ProSitePatterns Protein kinases ATP-binding region signature. 816 839 IPR017441 GO:0005524
Lele21g1929 1346 Pfam Leucine Rich repeat 246 261 IPR001611 GO:0005515
Lele21g1929 1346 Gene3D Ribonuclease Inhibitor 407 521 IPR032675 -
Lele21g1929 1346 Gene3D Ribonuclease Inhibitor 29 174 IPR032675 -
Lele21g1929 1346 SUPERFAMILY RNI-like 83 307 - -
Lele21g1929 1346 Gene3D Phosphorylase Kinase; domain 1 771 889 - -
Lele21g1929 1346 FunFam Leucine-rich repeat receptor-like protein kinase 890 1096 - -
Lele21g1929 1346 SUPERFAMILY beta-beta-alpha zinc fingers 1219 1257 IPR036236 -
Lele21g1929 1346 ProSiteProfiles Protein kinase domain profile. 810 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1929 Lele-ChrLele21 26455754 26461069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1929 4 1086 Receptor kinase-like Gene Family AT1G55610 31.172 4.80e-147 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Lele21g1929 Pkinase 8.8e-45 CL0016
TF C2H2 Lele21g1929 Pkinase 8.8e-45 CL0016