Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1924 ATGGCGCTGTTCAGAAGGTTCTTTTACCGGAAGCCGCCGGATCGGCTTCTGGAGATCTCCGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCACAGATGTCTTGGAAGAAGATGAATACAAAGTTTATATGGGGGGAATTGTAGCTCAGCTACAGGACCACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTCAGGGAAGGGGAGAAGCGTAGTCAAATTTCAGATATATTGTCTCAATATGACATGACAGTTATGGAATACCCTCGTCAATATGAGAGTTGTCCTCTTCTGCCTTTGGAAATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGTCAACAAAATGTTCTTTTGATGCATTGTGAAAGAGGAGGTTGGCCTGTGCTTGCGTTCATGCTAGCAGGTCTTCTTTTGTACAGGAAACAGTACAATGGGGAGCAAAAAACCCTTGAGATGGTCTACAAGCAAGCTCCTAAAGAACTTCTCCACCTTCTATCTCCTTTGAACCCACAACCTTCTCATTTGAGATATCTTCAATACATTTCCAGGAGAAATATGGGTTCTGAGTGGCCTCCATCAGACACACCCTTATATTTGGATTGCCTGATTCTTAGAGTCCTTCCGTTATTTGATGGTGGAAAAGGTTGTAGGCCAGTTGTACGTGTTTACGGTCAGGACCCATCAAAACTTGTTAATAGAAGTTCTAAGCTTCTTTTTTCTACTTCAAAGAACAAAAAACATGTTCGCCTCTACCAACAGGCAGAGTGTATGCTGGTGAAAATTGATATCCAATGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATACGGACGATGACTTCAGTCGTGAGGAGATGATGTTTAGAGTTATGTTTCACACAGCATTTGTGCGTTCAAACATATTGGTGCTCAACCTTGACGAGGTTGATATTTTGTGGGATTCTAAGGATCAATTTCCTAGGGATTTTAAAGCAGAGGTACTTTTTTTGGACGCTGATGCTGTTATGCCTAATCTAACCACAGTCAGGGAAAGTGAAGATGCAAATGAGACAGGAACTGCATCGCCTGAGGAATTTTATGAGGTGGAAGAGATATTTAGCAATGTAGTTGATGTGCAGGAAGGTAAGGTAGGTTATGATTCTCTTCTGGCTCATGACAGTGTAATAGATGATCAAAACCAAAAAGAAGTATGGAAAGAGGACTTTGATCCTCCCACTTTTCAGGAATGTACATCAGATGATCGGACCTACAAACAGGACAGAAGGATGGATTCTGGTTCTAATGCAGTGAAAGACATTGCTGTTGATGATGTGAAGTACAAGCTTGATGAGAGTGTGGATTTTAATAATCATGAAGTGAAAGATATCGCTGTGGATGATGGAGAAATTAAGAATACCTCTACAGTAGTCACTACTGATATCATTATGGAAATGAATGATGTCAATGAAGACATTCCTGGGCAATTGGAAGATATGGACGACAAATATGATGAATTTGGCAATGCAATAGAGAAGAAATTAGATTCCAAGGGAGGCCAGCAGAAGCATGATTTTTCCAGACAAAAATCTGATAAAGTACCACCTGTGGCGAAAAAACAACCTTCGTCAAACTTGAAGCCAGTGGGAGATACATTTACAGCTAAGCAAAAGATTAAGCAGCTTGAATCACAAGGTAGTCTAGCAAAACAAGCAAAGCCAAATGCAGTAACTAGGTGGATTCCTCCTAACAAAGGTTCTTATGCAAATTCAATGCATGTTTACTATCCACCATCAAGGTATAATAGCGCACCTGCTGCTCTTTCCAACTCTAACTCTTCAAAGGAGAAAACTATAGATGCCAAAGCAAGGTCTGCCTCTGCACCTGTTGTCTCTGGAACACCTGTTTCTAGTGACAAGACAAATGGATTGGTATGTCAAAAGGTGGACGTGCCAAAATCTGCAGACTCCATAGCAGAAATGGAAGAAGAAAACTTGCCATCAATTAAAGAGACATGTCTTCAAACACCAAGTCAAGTGCCACTTAGTAGCTCGACACAAGTGTTGCAACCTCCCCCACCCCCACCCCCACCCCCTCCTTCATTTCATGCTAAAAAATCTATGGCATATGCTTTTGAAACATCATCAGTTAGTGGACAAAACCAAGAGATGGATTTACAGCCTGCAACTTCTTCATCTCCTCCCCCTCCTCCACCCCCTCCTCCTTTTACTAATAGAACAATCACGCCAGGAGTTTTTAGAATGTCTAGTGTAGTTACCCCTCTCACTCCCCTTTCTCGTCCTTCACCACCACCTCCAAGGTATGGGCTTTCAATCTCTCCACCTCCTCCACCTCCACCTCCACCGCTATCTTCAAGGGGTATTTCTCCATTGTTGTCTACACCCATATCACCGCCCCAATCTTCACCTTCACCTACCCAATCCATACCTTTTTTCCACCCTGCTCCCCCAACCCCACCTCCACCTCCACCTCCACCTCCCCCTCCCTTTAGTAGAACTTCATTGTCCCCACCATTGTCTTCTTTGAGTAAAGTTCCATCTCCACCCCGACCTTCTTTGGGTAGACCCCCACCCCCACCTTCTTTGGGTAGACCTCCCCCTCCCCCTCCCCCTCCCCCACCTCCTTTAAGTAGAGCTTTGCCTCCACCACCTCCTCCTCCTTTAAGTAGGGCTCCACCACCACCACCGCCTCCTCCTTTTAATAGAGCTCCACCTCCTCCTCCTAGGCATGGAGCCTTGACTCCACCTCCCCCGCCACCCCCACTTTTATCAAGAGGAGCACCATCTCCACCACCACCTCCACCATCAAGAGGAACACCTCCTCCACCGCCACCTCCCCCATCAAGAGGAGCACCTCCTCCACCGCCACCTCTATTAAACGGAGCACCCCCACCTCCTAGCCTACCTCCTCCCCCTCCTCTTGGAGCACGTGCTCCTACTCCCCCTGGACCTCCAGGTGGTATGCCGCCACCGCCTCCACCCTTAGGCTCAAGAGTTTCAAATTCTGATCCAAGAGGACGAGGGCGTGGACTTTCACGTCCTAGTGGGGGTGGTGCAGTAGCACCTCGAAGATCCTCCTTAAAGCCTCTACATTGGAGTAAGGTGACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCTCAAATTGCCCCGGAATTTGACTTTTCAGAGTTAGAGAGCCTTTTCTCTGCAAATGTTCCTAAACCTGCTGGTTCAGGTGGTAAATCTGGAGATCGACGTAAATCTGCTGGGTCCAAACCTGACAAAGTTCACTTGATTGACCTGAGGAGGGCCAATAATACTGAAATTATGCTTACAAAGGTTAAGATGCCCCTTTCTGATATGATGGCTGCAGTACTAGCTATGGATGAGTCGGTATTAGATGTTGATCAGGTTGAAAATCTCATCAAATTTTGTCCTACTAAAGAGGAAATGGAACTTTTGAAGGGATATGCTGGGGACAAGGAGAATTTGGGAAAGTGTGAGCAGTATTTTTTGGAGCTGATGAAAGTTCCACGAGTGGAGTCAAAATTAAGAGTATTTTCTTTCAAGATCCAGTTTGGTTCTCAGATTACTGAATTCAAGAAGAGTTTAAATACTGTGAACTCTGCCTGTGAAGAGGTCCGAAAATCTGTCAAACTGAAGGAGATAATGAAGAAAATTCTTTACTTGGGGAATACACTGAATCAAGGAACAGCAAGGGGATCTGCAGTTGGATTCAAGTTGGATAGTCTATTAAAGCTCACTGACACTCGTGCTTCTAACAATAAGATGACACTGATGCATTACCTTTGCAAGGTCCTTGCTGAAAGGGCACCTTGGCTTCTTGATTTTCACCTAGACCTAGTCAGCCTGGAAGCTGCTACTAAGATACAATTGAAGTCATTAGCTGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAGCAGGAGCTTGCTGCATCTGAAAACGATGGACCTGTGTCTGAAATTTTCCGCAAGACATCAAAAGAATTTGTTGTTGGCGCTGAATCAGAGGTGGTATCTGTAACAACATTATATTCTGTGGTGGGTAGAAATGCAGATGCACTCGCGCTTTATTTTGGTGAGGATCCTGCCCGCTGCCCATTTGAGCAAGTTACTGCAACTCTCCTCAATTTTATAAGGCTGTTTCGTAAAGCACATGAAGAAAATTGTAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCTAAGGGCGTTAACTTGACAAAGAAAAGTGCAAGATAG 4311 0.4456 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYMGGIVAQLQDHFPDASFMVFNFREGEKRSQISDILSQYDMTVMEYPRQYESCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGEQKTLEMVYKQAPKELLHLLSPLNPQPSHLRYLQYISRRNMGSEWPPSDTPLYLDCLILRVLPLFDGGKGCRPVVRVYGQDPSKLVNRSSKLLFSTSKNKKHVRLYQQAECMLVKIDIQCRVQGDVVLECIHTDDDFSREEMMFRVMFHTAFVRSNILVLNLDEVDILWDSKDQFPRDFKAEVLFLDADAVMPNLTTVRESEDANETGTASPEEFYEVEEIFSNVVDVQEGKVGYDSLLAHDSVIDDQNQKEVWKEDFDPPTFQECTSDDRTYKQDRRMDSGSNAVKDIAVDDVKYKLDESVDFNNHEVKDIAVDDGEIKNTSTVVTTDIIMEMNDVNEDIPGQLEDMDDKYDEFGNAIEKKLDSKGGQQKHDFSRQKSDKVPPVAKKQPSSNLKPVGDTFTAKQKIKQLESQGSLAKQAKPNAVTRWIPPNKGSYANSMHVYYPPSRYNSAPAALSNSNSSKEKTIDAKARSASAPVVSGTPVSSDKTNGLVCQKVDVPKSADSIAEMEEENLPSIKETCLQTPSQVPLSSSTQVLQPPPPPPPPPPSFHAKKSMAYAFETSSVSGQNQEMDLQPATSSSPPPPPPPPPFTNRTITPGVFRMSSVVTPLTPLSRPSPPPPRYGLSISPPPPPPPPPLSSRGISPLLSTPISPPQSSPSPTQSIPFFHPAPPTPPPPPPPPPPPFSRTSLSPPLSSLSKVPSPPRPSLGRPPPPPSLGRPPPPPPPPPPPLSRALPPPPPPPLSRAPPPPPPPPFNRAPPPPPRHGALTPPPPPPPLLSRGAPSPPPPPPSRGTPPPPPPPPSRGAPPPPPPLLNGAPPPPSLPPPPPLGARAPTPPGPPGGMPPPPPPLGSRVSNSDPRGRGRGLSRPSGGGAVAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDFSELESLFSANVPKPAGSGGKSGDRRKSAGSKPDKVHLIDLRRANNTEIMLTKVKMPLSDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYAGDKENLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQITEFKKSLNTVNSACEEVRKSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLAERAPWLLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVKQELAASENDGPVSEIFRKTSKEFVVGAESEVVSVTTLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGVNLTKKSAR 1436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1924 1436 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1023 1424 IPR015425 -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 848 1004 - -
Lele21g1924 1436 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Lele21g1924 1436 Gene3D - 205 336 - -
Lele21g1924 1436 CDD PTP_PTEN-like 16 190 - -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 656 1033 - -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 729 745 - -
Lele21g1924 1436 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 1076 1102 - -
Lele21g1924 1436 FunFam Formin-like protein 1023 1410 - -
Lele21g1924 1436 SMART PTEN_C2_2 198 338 IPR014020 -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 686 702 - -
Lele21g1924 1436 Coils Coil 1305 1332 - -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 802 840 - -
Lele21g1924 1436 Pfam Formin Homology 2 Domain 1029 1398 IPR015425 -
Lele21g1924 1436 SMART it6_source 688 1436 IPR015425 -
Lele21g1924 1436 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1099 1426 - -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 748 762 - -
Lele21g1924 1436 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 1414 1436 - -
Lele21g1924 1436 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Lele21g1924 1436 Gene3D Formin, FH2 domain 1025 1410 IPR042201 -
Lele21g1924 1436 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 763 792 - -
Lele21g1924 1436 Coils Coil 1399 1433 - -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 1414 1430 - -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 668 685 - -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 514 549 - -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 603 641 - -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 710 728 - -
Lele21g1924 1436 MobiDBLite consensus disorder prediction 514 534 - -
Lele21g1924 1436 PANTHER FORMIN-J 936 1430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1924 Lele-ChrLele21 26408877 26417399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1924 1 610 FH2 protein (formin) Gene Family AT5G07740 66.176 0.0 816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1924 21 26408877 26417399 Lele23g0089 23 585740 595111 hybridization
Lele21g1924 21 26408877 26417399 Lele24g1840 24 23322914 23331700 hybridization