Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1917 ATGGAGATTGAAGGGTTTGATTTGAACAAAGTCTATGCTAATGCTGGAAATCATAGCAAGAGGGCTGATGATTTCATTGATAGAAGCAAGGTGAAAATATTGTTGTGCGATAACGATACCAAGAGTTCGGAAGAGGTCTTAACGCTTCTTTCGGGATGTTCTTATCAAGTTACTTCAGTAAGCTCGCCAAGGCAGGTAATCGATGTATTGAATGCAGAGGCACAAGATATTGATATCATACTAACTGAAGTTGACCTTCCAATGAAGAAGGGCATGAGGATGTTGAAGTACATTGCACGAAACAAAGATTTGCATCGAATTCCTGTCATAATGATGTCGGCACACGATGAGGTATCCATTGTTATGAAGTGTTTGAGACTTGGAGCAGCAGACTATCTAATAAAGCCTTTACGCTCTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTTGGTCTGACAGAGAAGAACATAATGAACTATAATTTTGATCTGGTAGCATCAGCCATAATGAACTATGATTCTGATCTGGTAGCATCAGACCCTGGAGATGGTAATACAACCACTACCGCCTTGTTCTCAGACGATACAGAAGACAAGTCCAACAGAAGCACTAATCCAGAGACAGGAATGTCAAGCCAGCAGCAACATGAGTCTTCAGCTGCTGCTACCTATGCTCCTGAGAAGCCTCCGGTTGTTCATGCATCAGATTATTGGCCTGGTGTGCCTGGAATTAGTGATCGCCAGACAAGAAACTGTTCTTCAGCACCAAAGAAGAATGGACTTAGGATTGGGGAGTCATCGGCCTTCTTTAGTTATGTTAAAACAACCATGCAAAAGAGCAACATACAAGGGATTCCTCAAGTTCAGAATAATGCCGCTCCGCAACTGAGGATGGAAGACGTGCATCAAACTTGTCCACAGGAGGTTCATGAAACTGGAGAGCCAAGTGAGAGACCTAATAAAGATGATTTGCCCAGCAGCATCAGTAACCCTGATTCTTTCTCCATCGACAATGCTTCTGCTCCCCCCGCATTCATGGGAAATCTAGATCAAAAGAACTTCAGTGAAGAACATTTACCACAAGATGTCATCCGTCTTAGAAATGGAAGTCATATTTCTGAGACTGAAGTCCCAGGTATTACTTCCCAACATGCTCATTTATATTATGTTTCAGGGTTCTTCAATCACCTTCTGATGACATCCTCAGCGCCGATGTATCCAAAGAATCACCAGGACCAACAGAATCATGCTAGTGCAACTATGATTGCACGGCACAATGACATTTCCCATTGTCCTCCAAATGGGAAAGGGATAAGTTCATTCCCATATTACCCGATGACTATGTGCTTACAGCCTGGTCAGACGATGTCCTCAGCTCATTCATGGCCGTTATTTGGAAGTTCAAGTTCTTCATCCAAAGCAAGACTGGATATAGTTGATAGAAGAGCAGAAGCATTGATGAAGTTTAGAAAGAAAAGGAAAGAACGATGCTTTGATAAGAAAATTAGGTATGTCAACCGGAAGCAGCTTGCGGAAAGGCGACCTCGCGTGAGGGGACAGTTTGTGAAGAAGTTGAACGGAGTAGTCAATGTTGATCTCAATGGACAACCTGCTTCCATTGAGTGTGATGAAGAGGAGGACGACGACGACGATGAAGAGAACAATGTGATAGAGTCATCTCCTGAAGATGCTCGAGATCAATGA 1722 0.4297 MEIEGFDLNKVYANAGNHSKRADDFIDRSKVKILLCDNDTKSSEEVLTLLSGCSYQVTSVSSPRQVIDVLNAEAQDIDIILTEVDLPMKKGMRMLKYIARNKDLHRIPVIMMSAHDEVSIVMKCLRLGAADYLIKPLRSNELLNLWTHMWRRRRMLGLTEKNIMNYNFDLVASAIMNYDSDLVASDPGDGNTTTTALFSDDTEDKSNRSTNPETGMSSQQQHESSAAATYAPEKPPVVHASDYWPGVPGISDRQTRNCSSAPKKNGLRIGESSAFFSYVKTTMQKSNIQGIPQVQNNAAPQLRMEDVHQTCPQEVHETGEPSERPNKDDLPSSISNPDSFSIDNASAPPAFMGNLDQKNFSEEHLPQDVIRLRNGSHISETEVPGITSQHAHLYYVSGFFNHLLMTSSAPMYPKNHQDQQNHASATMIARHNDISHCPPNGKGISSFPYYPMTMCLQPGQTMSSAHSWPLFGSSSSSSKARLDIVDRRAEALMKFRKKRKERCFDKKIRYVNRKQLAERRPRVRGQFVKKLNGVVNVDLNGQPASIECDEEEDDDDDEENNVIESSPEDARDQ 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1917 573 Pfam Response regulator receiver domain 33 144 IPR001789 GO:0000160
Lele21g1917 573 Pfam CCT motif 488 530 IPR010402 GO:0005515
Lele21g1917 573 MobiDBLite consensus disorder prediction 328 343 - -
Lele21g1917 573 ProSiteProfiles Response regulatory domain profile. 32 150 IPR001789 GO:0000160
Lele21g1917 573 MobiDBLite consensus disorder prediction 545 563 - -
Lele21g1917 573 MobiDBLite consensus disorder prediction 542 573 - -
Lele21g1917 573 SUPERFAMILY CheY-like 29 157 IPR011006 -
Lele21g1917 573 MobiDBLite consensus disorder prediction 313 355 - -
Lele21g1917 573 SMART REC_2 31 146 IPR001789 GO:0000160
Lele21g1917 573 ProSiteProfiles CCT domain profile. 488 530 IPR010402 GO:0005515
Lele21g1917 573 MobiDBLite consensus disorder prediction 209 227 - -
Lele21g1917 573 MobiDBLite consensus disorder prediction 313 327 - -
Lele21g1917 573 MobiDBLite consensus disorder prediction 185 265 - -
Lele21g1917 573 Gene3D - 31 234 - -
Lele21g1917 573 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 253 IPR045279 GO:0009736
Lele21g1917 573 MobiDBLite consensus disorder prediction 186 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1917 Lele-ChrLele21 26370140 26374108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1917 20 569 Response Regulator Gene Family AT5G61380 43.012 2.76e-146 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele21g1917 Response_reg 6.8e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1917 21 26370140 26374108 Lele21g1917 21 26370140 26374108 ECH
Lele21g1917 21 26370140 26374108 Lele23g0097 23 630298 634734 hybridization
Lele21g1917 21 26370140 26374108 Lele24g1833 24 23288480 23292311 hybridization