Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1910 ATGTCTTCCCTCCCTTCTCTCTCCCAGATCACCAGGGATGAAGATCAGATGAATTTGCCTCCTGGCTTTCGGTTTCACCCAACAGATGAAGAGCTTATCACTCATTATCTGTTCAACAAGGTTACTCTTACAAACTTCTTTGCTATAGCCATTGGAGAAGTGGACTTGAACAGGTCCGAGCCTTGGGATTTGCCACGGAAAGCGAAACTGGGAGAGAAAGAGTGGAAGAATTCTGGTGGCAACAAAACCCATATATCGGCTAGAATGAGGTTTGAATCCCCTGGAAATGGATTTGGTGGTTCTTCAGGTTTACCAGCTCTCGCAGTTTCTTCTCCTGAATCTGCTTACGTGTCCTGCTTCTCCATTGCAATCGATGATCAAAGAAACCAAGGAGGGATCTTTGATTCCTTAGGAAACTCGAACTCCCTTTTGGGGATTCCTTCAAGCCCTCCTCCAGAAATTCTCCCAAGAATCCATCTTTCTGGATCATTTCAAGCTCCTGCAAATTTGCCAATATCATCAGGTCTTGCTTTCTCTGGTCAGGACCACCAGAACCTGCTTAAGGCTTTTCTTGAAAACCATGGATCAAACTACAAGGGAGAACAAATTGCGAGTGTTCCACAAGAAACTGATATGAATCCTGAGATTTCTTCTGTGATATCAAGTTTTAATGATTCTGCTGCTGCACTAGTAGTGGAGCGTGATAGCTTGTGGAATTACTGA 723 0.4412 MSSLPSLSQITRDEDQMNLPPGFRFHPTDEELITHYLFNKVTLTNFFAIAIGEVDLNRSEPWDLPRKAKLGEKEWKNSGGNKTHISARMRFESPGNGFGGSSGLPALAVSSPESAYVSCFSIAIDDQRNQGGIFDSLGNSNSLLGIPSSPPPEILPRIHLSGSFQAPANLPISSGLAFSGQDHQNLLKAFLENHGSNYKGEQIASVPQETDMNPEISSVISSFNDSAAALVVERDSLWNY 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1910 240 SUPERFAMILY NAC domain 15 75 IPR036093 GO:0003677|GO:0006355
Lele21g1910 240 Gene3D NAC domain 28 77 IPR036093 GO:0003677|GO:0006355
Lele21g1910 240 Pfam No apical meristem (NAM) protein 20 75 IPR003441 GO:0003677|GO:0006355
Lele21g1910 240 ProSiteProfiles NAC domain profile. 19 161 IPR003441 GO:0003677|GO:0006355
Lele21g1910 240 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1910 Lele-ChrLele21 26330620 26331879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1910 7 75 NAC Transcription Factor Family AT5G39610 69.565 1.07e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele21g1910 NAM 4.8e-14 No_clan