Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1895 ATGAAGAAGGTGATAACTAGAGTTGACAACACGGTGATTCGAAACATTCGATACTGTGAGTGTCAGAAGAATCATGCAGCTTCCATGGGAGGGTATGCTGTGGATGGTTGCAGAGAATTCATGGCCAGTTCCAGAGAAGGCACGAGTGGGGCTCTCACTTGCGCGGCTTGCGGCTGCCACCGTAATTTCCACAGAAAACAAGAGCAAGTCGTCGAGGGTCGTCTGAGGCTCTTAGTTTCAGATTATGCAGAAATCGTGCATGTTCATCCTTCTTATGTTCTCATGGGCAAGAAAACAGTTACCGCTCACCCACTTCGCCTGGTGATTAATTGCTCAACACCCAGATTTGCTGCGATGGGCAGAGGATTTGGACGCTTTGCTATGCTTGTAGTAGCTCCAGAGACTGTTAGCTGA 414 0.4855 MKKVITRVDNTVIRNIRYCECQKNHAASMGGYAVDGCREFMASSREGTSGALTCAACGCHRNFHRKQEQVVEGRLRLLVSDYAEIVHVHPSYVLMGKKTVTAHPLRLVINCSTPRFAAMGRGFGRFAMLVVAPETVS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1895 137 Pfam ZF-HD protein dimerisation region 16 68 IPR006456 -
Lele21g1895 137 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 17 67 IPR006456 -
Lele21g1895 137 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 15 86 - -
Lele21g1895 137 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 18 67 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1895 Lele-ChrLele21 26264439 26269671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1895 13 67 ZF-HD Transcription Factor Family AT1G74660 78.182 8.88e-28 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele21g1895 ZF-HD_dimer 2.3e-28 No_clan