LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele21g1894	ATGGGGAGACCTCCTTGCTGCGACAAAATTGGGGTTAAGAAAGGACCTTGGACCCCTGAAGAAGACATCGTCTTGGTCTCGTACATCCAGGAACACGGCCCCGGCAACTGGAGATCTGTTCCCACCAATACCGGTTTGATGAGATGCAGCAAAAGCTGCCGACTCCGATGGACCAACTATCTCCGCCCCGGTATCAAACGCGGTAACTTCACCGAACACGAAGAGAAGATGATCATCCACCTTCAAGCTCTTCTCGGAAATAGGTGGGCGGCCATAGCTTCTTATCTTCCACAGAGAACAGACAATGACATAAAGAATTACTGGAACACGCATCTGAAGAAGAAGCTCATGAAGAAGGCAGGAAAAAATGGTGGCGGCTGTAGGGAAGGTGGAAGCAGTAACGATCAGGAAGACGGTGGATATTTGTCGTCATCTTCATCGCAACCAAACAAGGGTCAGTGGGAAAGAAGGCTTCAAACCGATATCCACATGGCCAAACAAGCCCTTTGTGAAGCTCTCTCCATTGACAAGCCCCCTCCTTCCACATTAAATCATAATTTCCCCATCTTCTCTGACTGTAATAATAATAATAAGCCCTCATCATCATCCATTTCCTTCAACCCCATCACCACAACAACAAAATTACCCGACCAACTAGCACCTAATTCATCGTACGCGTCGAGTGCCGATAACATAGCTCGACTTCTGCAAAACTGGATGAAGAAGACGCCGAACACGTTCTCTGGTTCGACTTCGAGTGAAGGTGAAGGAGCACGGAGTGGGAGTGGGACTACAACACCAGATCAAGGCCTTGACTATAGCTCTCTCTTGAGCTTCAACAGTAACCCGAACAACAACTCTGATGTGTCCACAGAGAGTAATAACTTCTTGCAAGAAGAAAGCAAGCCGAATTTGGATTCTCATCATCATCATGTGCCTTTCATGCTTCTGGAGAATTGGCTTTTTGATGATGCTGCAAATCCACAAGGCCACGAAGATCTGTTGACCATGTCACTTCAGGAAACTACATCAGACCTATTTCAGACTCAGTTGGGGAAGGAGAAATTCTAG	1071	0.4706	MGRPPCCDKIGVKKGPWTPEEDIVLVSYIQEHGPGNWRSVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTEHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLMKKAGKNGGGCREGGSSNDQEDGGYLSSSSSQPNKGQWERRLQTDIHMAKQALCEALSIDKPPPSTLNHNFPIFSDCNNNNKPSSSSISFNPITTTTKLPDQLAPNSSYASSADNIARLLQNWMKKTPNTFSGSTSSEGEGARSGSGTTTPDQGLDYSSLLSFNSNPNNNSDVSTESNNFLQEESKPNLDSHHHHVPFMLLENWLFDDAANPQGHEDLLTMSLQETTSDLFQTQLGKEKF	356

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele21g1894	356	MobiDBLite	consensus disorder prediction	119	154	-	-
	Lele21g1894	356	Gene3D	-	69	128	-	-
	Lele21g1894	356	MobiDBLite	consensus disorder prediction	136	154	-	-
	Lele21g1894	356	FunFam	MYB-related transcription factor	13	66	-	-
	Lele21g1894	356	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	9	65	IPR017930	-
	Lele21g1894	356	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	66	116	IPR017930	-
	Lele21g1894	356	ProSiteProfiles	Myb-like domain profile.	62	112	IPR001005	-
	Lele21g1894	356	MobiDBLite	consensus disorder prediction	243	301	-	-
	Lele21g1894	356	Pfam	Myb-like DNA-binding domain	67	112	IPR001005	-
	Lele21g1894	356	Pfam	Myb-like DNA-binding domain	14	61	IPR001005	-
	Lele21g1894	356	MobiDBLite	consensus disorder prediction	243	304	-	-
	Lele21g1894	356	Gene3D	-	13	66	-	-
	Lele21g1894	356	CDD	SANT	16	61	IPR001005	-
	Lele21g1894	356	SMART	sant	66	114	IPR001005	-
	Lele21g1894	356	SMART	sant	13	63	IPR001005	-
	Lele21g1894	356	PANTHER	MYB FAMILY TRANSCRIPTION FACTOR	1	281	-	-
	Lele21g1894	356	ProSiteProfiles	Myb-like domain profile.	9	61	IPR001005	-
	Lele21g1894	356	CDD	SANT	69	112	IPR001005	-
	Lele21g1894	356	SUPERFAMILY	Homeodomain-like	11	108	IPR009057	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele21g1894	Lele-ChrLele21	26252244	26253565	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele21g1894	1	339	MYB Transcription Factor Family	AT5G62470	53.186	2.21e-113	332

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Lele21g1894		Myb_DNA-binding	5.1e-14	CL0123