Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1887 ATGGAAGGAGGTGATGATCTCCACCACCACCGTCACCACCATCATCACCACCGTCCCACCTTTCCCTTTCAGCTCCTTGAGAAGAAAGATGATCATCAAGAAGCTGCTTCTTGCTCCACCTCTTCTCCTTACCCTTCCTTGGCCATCTCTGCTGAACCTCCTGCCTCCTCCAATCCCAGCAGATCCAATAACCAGATCGTCCCCTCCTCGGAACCCTCCTCCAATAAGAAGCCTCCTCCTAAGAGAAACTCCACCAAGGACCGTCACACCAAGGTCGACGGACGTGGCCGTCGCATTAGAATGCCAGCCCTCTGTGCCGCTCGTGTCTTCCAGCTCACCCGCGAGCTTGGCCACAAGTCTGACGGTGAAACCATCGAGTGGCTGCTCCAGCAGGCCGAGCCCGCTGTCATCGCTGCCACCGGCACCGGAACCATCCCGGCTAACTTCACTTCGCTCAACATATCCTTGAGGAGCTCGGGATCCACTACGTCGGTCCCGTCTCAGTTAAGATCCTCCTACTTTAATCCCAACTTCTCTGTCCAACAGCGCCGGAGCCTGTTCCCAGGAATTGGTTTGTCTTCCGATAATACCACAGCCTCTACCCTCCTAAATTTTCAATCCGGTAACCTAACCACGAACCTGTTGCAAGCTAAGCAAGAGCTGCGCGACGGGGCTGTTCCCCCTTTGGCTGCTACGTCGTTGGATTTGTCTCCCGAGATCCCAGAAGAAGGGATGGGAAGAAGACGGCGGCCGACGGAGCAGGACTTGTCGTCAACACAGCATCAAATGGGGAGTTATTTGTTGCAGTCAAGCGCGGGGGCGATACCGGCGAGCCATGCTCAGATTCCAGCCAACATTTGGATGGTGACGAATTCAAGTAACCAGGTCATGAGCGGTGATCCTATATGGACATTCCCGTCGGTAAACAACGGTGGATTGTATAGGGGGAGCATGTCGAGTGCGTTGCATTTCATGAACTTCCCTACGCCCATGGCCTTATTGCCAGGTCAACAATTTGGTTCGTCGGGAATAAGTAGTGGAGGCGGTGGTGGCGTTGCATCGGGCGCCAACAATATTAACGAAGGACATTTGAGTATGCTGGCAGGGCTGAGCCCGTATCGGCCGGTGATGGGGCTGTCAGAGTCTCAGGCGAGTGGGTCCCAATCGCATCACGGTGGCGGAGGCGACGATCGTCACGACACCACCAGCCACCACTCATAG 1221 0.5536 MEGGDDLHHHRHHHHHHRPTFPFQLLEKKDDHQEAASCSTSSPYPSLAISAEPPASSNPSRSNNQIVPSSEPSSNKKPPPKRNSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTTSVPSQLRSSYFNPNFSVQQRRSLFPGIGLSSDNTTASTLLNFQSGNLTTNLLQAKQELRDGAVPPLAATSLDLSPEIPEEGMGRRRRPTEQDLSSTQHQMGSYLLQSSAGAIPASHAQIPANIWMVTNSSNQVMSGDPIWTFPSVNNGGLYRGSMSSALHFMNFPTPMALLPGQQFGSSGISSGGGGGVASGANNINEGHLSMLAGLSPYRPVMGLSESQASGSQSHHGGGGDDRHDTTSHHS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1887 406 MobiDBLite consensus disorder prediction 377 406 - -
Lele21g1887 406 Pfam TCP family transcription factor 84 208 IPR017887 -
Lele21g1887 406 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 43 393 IPR005333 GO:0003700
Lele21g1887 406 MobiDBLite consensus disorder prediction 392 406 - -
Lele21g1887 406 MobiDBLite consensus disorder prediction 228 254 - -
Lele21g1887 406 MobiDBLite consensus disorder prediction 36 79 - -
Lele21g1887 406 MobiDBLite consensus disorder prediction 1 20 - -
Lele21g1887 406 MobiDBLite consensus disorder prediction 25 97 - -
Lele21g1887 406 ProSiteProfiles TCP domain profile. 85 139 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1887 Lele-ChrLele21 26202235 26203455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1887 19 398 TCP Transcription Factor Family AT3G47620 41.372 4.58e-63 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele21g1887 TCP 1.7e-37 No_clan