Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1872 ATGATGGGGAAGTCACCGGGAAAATGGATCAAAACTGTGCTATTTGGGAAAAAGTCATCCAAATCTAATATTTCAAAAACGAGAGAGAAACCTGTTAAACAGAAAGAAGTGCCGATCGCTTCCAAGGCATCAGAGAATGAGTTTTCTTTTGATCCAACTCCCATTACTTTTGCTAGAAATGAGAGGGATCCAGAACTGGAAAATAAGGATCCAGAAAATCTTTTGCTGCAGAATCAGTTAGATATCGCAGGATCTGATCACCAAGATGCCCCTCCTGATCCAGAGAGAATTATGCAAGAGGAAGCTTCCACAAAGGTGCCGGCTACTTTACCTCCTGATCTAGAGAAAATTAAGCTGGAGGAAGCCACATTGGAGATGCAGGCTACTTTAACTCCTGATCTAGACAAGATAAAGCAGGAGGAAGCTGCAGTGAAGTTGCAAGCTACTTTCAGGGGTTATTTGCTGTCAATCTTCTTTACTGCTTCTGTTCTGAAAGTTCTCGTAAATGTCTTCAGAAACAGTTTGATTGGTGTCAAGGCTTGCAGAGCTTTCAAGACTCTTAAAGGCATTATAAGGTTGCAAGCGCTTATCCGAGGGCACTCGGTTAGGAGACGAGCTATTTCTACTTTATTTTGCATGTACGGGATTATTAAGTTGCAAGCACTTGTTCGTGGTCGAAGAGTTAGGCAGTCTGATATTGGATATGAAATGCATGGGAAGTGCAATCTTGTGAAGCCTCTGGCTGACAAGTCTGGCGACTCAGTTGGGTTAACCGCAAAAATTGCAGATGTATCAGCGAATAGTTTTATCCACAAGCTTCTTGCTTCATCAACTGCAACAAATGTTTTGCGTCATCAATATGCTTATGGGGATACAAATGTAGTCCTAAGTTGGTTGGAGCGCTGGTCGAGGTCTCGCTTTTGGAAACCAGTTCCCAAACCCAAGAAACTCCTAGACTCTAAATCTCAGAGAAAGCTGGGTAATAATATTTCAAATGGAGATGCTCAAATGGACAAGCCAAAACGTGGTAACTGGAAGATTCCTTCTACAAGTTCAGACTTGGTCTTAGTGCAAGAAAATCCTGACTTTGAGAAACCGAAACGAAGCCTGAGAAAAGTTTCCAGCAAGCCCACGGTCACAGAACCAGTGCAGGAAAATTCAGAAAATGAGTTTGAGAAGGTTAAGCGTAACTTGAGAAAGGTTCATAACCCTGTTGTAGAGAAGTCTGCTCAGTCAGAAGTTGAATCAGAGACTGTGAAGCAGCATTCAGAAAAGGCACCAGTTACCTCAGGTTATGGTGTTTCAGAAGAAGGATTCAAAAGTTGTTCCAACGAGAAGATAAAAATGGATGCAACATCGGCCATGTCCTACGAGCCTGATGGAGAAGTTACACTTAGAATTTCAGTTGGCAAAGCAAAGGAGGCGTCTAACATGCCCAGTACTCAAGTACCCGTCAATTCAGTGCCCTTGAGAGAGAATACAAGTAGACGTAAGAACAATTCTGGTGAAGAAGCTACCAAAGAGCTAAAAGTTTCACATGAGACTTGTAATGATGAAAAATCTTCCCTAACAAATGGACATTTGAGTCTTAAGGAAGATTCGAAAAGAAATGAAAACCAGAAACCGGGCCGGAAATCCCCAGCTCTAGCTAAGCAGGAAGTTGTAGAGGATGGTTTACAGAATAGCCCAACTGCCAGTTTACCAAGTTATATGGCGGCTACTGAATCTGCCAAGGCAAAGTTGAGAGCACAAGGGTCCCCAAGGTTAGGACAAGATGGTGGAGGTGAGAGAAGCAACATTACCCGGCGACATTCTCTGCCATCTTCAAATAACAGTAAAATTAGTTCTCATTCACCGAGAGCACACAGACCAGCTCAAGCGGGAGGCAAAGGGGGACACAGGAGTGGTGACAGAACAATGGGTTCTTCCAGAGGTAGTAATGGTTCCCATCGCTTTTTGTTAGATAATAATAGCATGGGTCTTTACAGGAAAGTTAACTCAAGCAGAGTGGAGGAGGTGATTTCAAGTAGTAATGTTTTTCCTGAGTTGAACATGAGGATGCTGAAACTGGCAGATCTCTTGCATCTATCATGA 2094 0.4293 MMGKSPGKWIKTVLFGKKSSKSNISKTREKPVKQKEVPIASKASENEFSFDPTPITFARNERDPELENKDPENLLLQNQLDIAGSDHQDAPPDPERIMQEEASTKVPATLPPDLEKIKLEEATLEMQATLTPDLDKIKQEEAAVKLQATFRGYLLSIFFTASVLKVLVNVFRNSLIGVKACRAFKTLKGIIRLQALIRGHSVRRRAISTLFCMYGIIKLQALVRGRRVRQSDIGYEMHGKCNLVKPLADKSGDSVGLTAKIADVSANSFIHKLLASSTATNVLRHQYAYGDTNVVLSWLERWSRSRFWKPVPKPKKLLDSKSQRKLGNNISNGDAQMDKPKRGNWKIPSTSSDLVLVQENPDFEKPKRSLRKVSSKPTVTEPVQENSENEFEKVKRNLRKVHNPVVEKSAQSEVESETVKQHSEKAPVTSGYGVSEEGFKSCSNEKIKMDATSAMSYEPDGEVTLRISVGKAKEASNMPSTQVPVNSVPLRENTSRRKNNSGEEATKELKVSHETCNDEKSSLTNGHLSLKEDSKRNENQKPGRKSPALAKQEVVEDGLQNSPTASLPSYMAATESAKAKLRAQGSPRLGQDGGGERSNITRRHSLPSSNNSKISSHSPRAHRPAQAGGKGGHRSGDRTMGSSRGSNGSHRFLLDNNSMGLYRKVNSSRVEEVISSSNVFPELNMRMLKLADLLHLS 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1872 697 Pfam IQ calmodulin-binding motif 141 154 IPR000048 GO:0005515
Lele21g1872 697 Pfam IQ calmodulin-binding motif 188 205 IPR000048 GO:0005515
Lele21g1872 697 MobiDBLite consensus disorder prediction 472 654 - -
Lele21g1872 697 Pfam Protein of unknown function (DUF4005) 546 635 IPR025064 -
Lele21g1872 697 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Lele21g1872 697 MobiDBLite consensus disorder prediction 325 348 - -
Lele21g1872 697 MobiDBLite consensus disorder prediction 601 619 - -
Lele21g1872 697 MobiDBLite consensus disorder prediction 20 68 - -
Lele21g1872 697 MobiDBLite consensus disorder prediction 474 495 - -
Lele21g1872 697 MobiDBLite consensus disorder prediction 639 654 - -
Lele21g1872 697 MobiDBLite consensus disorder prediction 557 571 - -
Lele21g1872 697 PANTHER IQ-DOMAIN 5-RELATED 2 614 - -
Lele21g1872 697 MobiDBLite consensus disorder prediction 366 391 - -
Lele21g1872 697 MobiDBLite consensus disorder prediction 22 36 - -
Lele21g1872 697 MobiDBLite consensus disorder prediction 525 542 - -
Lele21g1872 697 ProSiteProfiles IQ motif profile. 188 210 IPR000048 GO:0005515
Lele21g1872 697 MobiDBLite consensus disorder prediction 496 517 - -
Lele21g1872 697 MobiDBLite consensus disorder prediction 407 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1872 Lele-ChrLele21 26113276 26116792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1872 2 648 IQD Protein Family AT1G74690 37.805 5.42e-96 306
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1872 21 26113276 26116792 Lele22g1842 22 23408668 23412309 ECH
Lele21g1872 21 26113276 26116792 Lele21g1872 21 26113276 26116792 ECH
Lele21g1872 21 26113276 26116792 Lele23g0141 23 904710 909620 hybridization
Lele21g1872 21 26113276 26116792 Lele24g1794 24 23036338 23051823 hybridization