Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1869 ATGACAAAACAAGAGCTTCAGAACGAAAAGGATGACATGCTTATTGACGGATACGAACCTGAAGCTCCTGGGCAAAAGCAGCAGAGTCATGTTTCTAGCGAGTTCAATCCGGATCACCTTAAAGTATTTTACGGAAAGCTATTTCCTTATGCTGATTTTTTTAGATGGATGTCTTATGGCAATGATGGGAAGCATCCCGGTTGCGACCCCTCTTACATCAGCCTGAGGGAATTTTCATTCTCGCTTGACAACGATATATTTCTACGATTCCAATCTTTCCACAGTGCCGTGGAGCTTGAAAACTCCATCAAAGAGAAATGCCCATTTAAGATTGATATTGGACCTGTATATAGCGTGGAGCCCACAAAAAGGCATGCCTATACTCAGACTGGTGATAGTGTCTTCGTTCCAATTGAGAGAGAGCTAATTTTTGATATTGATATGACAGATTACGATGATGTCAGATACTGCTGCACTGGTGCTGATGTTTGCTTGAATTGCTGGCCATTGATGACTATATCTATTAAAGTGATTGATACTGCCTTAAGAGATGATTTTGGCTTTAAACACATTCTATGGGTTTATAGTGGCCGCCGTGGTGTGCACTGTTGGGTCTGTGATGGGAAGGCAGGAAGATTGACTAACGAGCAGAGAGCAGCTATTGCTGACTATTTTCGTGTCTACAAGGGAAATGAAAATAGTCAAAAGAAGGTTTCGTTGACGGGCCATGCTCTTCATCCTTTCCTGGTGAGAGCATACACTGAAGTTCTTAAAGATTTTTTTGAGAAAGGACTACTAATAAGTCAAGCTTTACTTTCTACCGAAGAGAGATATGAGATGATCCTAGAGTTTATTCCAGACGCAGCAATTGCTTCTGAACTTAGGGGTAGATGGCAGGATAATAGGCGGTCTTCAAGTGCAAAAGAAGACATTAATGTTGTTCGATGGGAACAACTCAAACATTTGCTGTCAAAGAATAAGGCACTGGGACCGCGAAGATGTGTTGAAGAGATTGTGTTCTCCTATACTTACCCTAGGCTAGATATGGAGGTTTCGAAGCACATGAATCACTTGCTTAAAGCTCCATTCTGTGTACACCCAAAAACAGGTCGCATTTGCGTCCCCATTGATCCAAATCACTGTGAGGAGTTTGATCCTACCACAGTACCTACTCTTTCACAGCTTTTAGACGAGCTTAACGAAAGAGGTCCAAGAGATGATTTAGATGCGTTTGGTACAAGTATTTTTGTTTATTGGTCTTGCTCGATTTCAGAATGGACAGGAACTTCACTAGAGGGTGCCGTCAGCCTTTTCAGAACGTCATTCTTACAACCTCTACTAAAAGCTTGCAAGGAGGAGATAGAAAGTTCGTACAATGCAAAATTGCAGCAGTCAAAAAACTCCTTTAACTGGTAA 1416 0.4167 MTKQELQNEKDDMLIDGYEPEAPGQKQQSHVSSEFNPDHLKVFYGKLFPYADFFRWMSYGNDGKHPGCDPSYISLREFSFSLDNDIFLRFQSFHSAVELENSIKEKCPFKIDIGPVYSVEPTKRHAYTQTGDSVFVPIERELIFDIDMTDYDDVRYCCTGADVCLNCWPLMTISIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKAGRLTNEQRAAIADYFRVYKGNENSQKKVSLTGHALHPFLVRAYTEVLKDFFEKGLLISQALLSTEERYEMILEFIPDAAIASELRGRWQDNRRSSSAKEDINVVRWEQLKHLLSKNKALGPRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRICVPIDPNHCEEFDPTTVPTLSQLLDELNERGPRDDLDAFGTSIFVYWSCSISEWTGTSLEGAVSLFRTSFLQPLLKACKEEIESSYNAKLQQSKNSFNW 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1869 471 SUPERFAMILY Prim-pol domain 34 401 - -
Lele21g1869 471 MobiDBLite consensus disorder prediction 1 17 - -
Lele21g1869 471 PANTHER DNA PRIMASE SMALL SUBUNIT 27 456 IPR014052 GO:0003896|GO:0006269
Lele21g1869 471 Gene3D DNA primase, PRIM domain 25 452 - -
Lele21g1869 471 FunFam DNA primase 27 452 - -
Lele21g1869 471 Pfam DNA primase small subunit 144 377 IPR002755 GO:0003896|GO:0006269
Lele21g1869 471 CDD AE_Prim_S 49 386 IPR014052 GO:0003896|GO:0006269
Lele21g1869 471 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 41 398 IPR014052 GO:0003896|GO:0006269
Lele21g1869 471 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1869 Lele-ChrLele21 26095488 26100596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1869 1 471 Core DNA Replication Machinery Family AT5G41880 58.562 0.0 602