Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1868 ATGGAGTTTGCTTCAGGAAGATCTGCTAGCAGTGGTGATGATGAAGATCATCGTAAAGAAGGGATTGATATTGAGGTGCTGCCAATGGATGCTTATGGACCAAATATTGTATCTCCAACTAAAAAGGAAGAGGTGGAGGAGCTAGAATGTGCAAAAACGGAAATGGGAGAGGTGAGAGAAGAAAATGAAAGGCTGAAGCAGTGTTTGGATCGAGTTCTGAAGGATTACAGAACACTTGAATTGCAATTCAAAGATATTCTTCATAAAGAAACTAAAGAGGAAGAATCTGATGACCTAGTTTCTCTGAGCCTTGGAAGAGTTCATAATAATCATCCAACAAGAAACCAACATGATCATCAGAAAACAAAAGCTTTGAAACCATTATTATTGAAGAAGGATCATGAAGATCAGGACTTGGCTCTTGGATTGGACTGCAAATTTGAAACTTCAAAGTCAGGAAGCATAACGACTAATAATCCAAGCCCTACGAATAGTTCTCAAGAGCCACCAAGTAAAGCTATCAAAACAAGCAGAGATACTTCTTCTGCTGAAGACGAAGTTTCCCAAAACAATAATTCTGCAAAGAGAGCTAGGGTTTGTGTCAGAGCAAGATGCGACGCTCCAACTGTGCAAAGATGTGCCGAGGATATGTCCGTTTTAGTTACAACTTATGAGGGAATCCATAACCATCCTCTTCCTCTCTCAGCCACCGCCATGGCTTCCACTACTTCTGCAGCAGCTTCCATGCTTTTGTCTGGTTCATCATCATCAACTTCATCGGCTGCCGCCGCCATGCCCATCATCACTTCATCTGATCTCTATGGCCTGAATTTCTCCTTCTCAGATGGTTCCAGCAGATCAAAACCATTATATCTCTCCAATCCTTCATCTCTCTCATCATCATTGCCTTCTCACCCAACAATCACTCTTGACCTCACCACAAATTCAGCAGCCTCCAGATTCATGACCTCATCATCATCAAACTACAGATCATCATCATCATCATTATCGTACCCCTCTTCTTCCACGAGTCTCAACTTTAGTTCCCCAAACAACAATAATTTTCTCAGCTATAACAGTAATAATAACAGGAACGTTTTCAGCTCCATGAACCTTGCAAGGTCGACAATGATGAACAATATCTACAGCAGGCTGCCTTACGATCAAAAGAACAGTTTTATCAATAACCCAACTCATCCTACTCCTCATCCCCAACCTGCTCTACAGGATAGTATCGCCGCCGCGACCAAGGCCATTGCGGCGGACCCAAAGTTTCAATCGGCTTTGGCGGTGGCACTTAGTTCAATTATTGGCACAGGGAGTGGCATTTGA 1332 0.4272 MEFASGRSASSGDDEDHRKEGIDIEVLPMDAYGPNIVSPTKKEEVEELECAKTEMGEVREENERLKQCLDRVLKDYRTLELQFKDILHKETKEEESDDLVSLSLGRVHNNHPTRNQHDHQKTKALKPLLLKKDHEDQDLALGLDCKFETSKSGSITTNNPSPTNSSQEPPSKAIKTSRDTSSAEDEVSQNNNSAKRARVCVRARCDAPTVQRCAEDMSVLVTTYEGIHNHPLPLSATAMASTTSAAASMLLSGSSSSTSSAAAAMPIITSSDLYGLNFSFSDGSSRSKPLYLSNPSSLSSSLPSHPTITLDLTTNSAASRFMTSSSSNYRSSSSSLSYPSSSTSLNFSSPNNNNFLSYNSNNNRNVFSSMNLARSTMMNNIYSRLPYDQKNSFINNPTHPTPHPQPALQDSIAAATKAIAADPKFQSALAVALSSIIGTGSGI 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1868 443 MobiDBLite consensus disorder prediction 1 40 - -
Lele21g1868 443 Gene3D WRKY domain 172 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele21g1868 443 MobiDBLite consensus disorder prediction 9 25 - -
Lele21g1868 443 ProSiteProfiles WRKY domain profile. 210 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele21g1868 443 MobiDBLite consensus disorder prediction 150 196 - -
Lele21g1868 443 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 40 210 IPR044810 GO:0003700
Lele21g1868 443 SUPERFAMILY WRKY DNA-binding domain 199 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele21g1868 443 Coils Coil 41 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1868 Lele-ChrLele21 26091528 26094294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1868 47 438 WRKY Transcription Factor Family AT1G18860 32.449 5.40e-37 140
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1868 21 26091528 26094294 Lele22g1838 22 23384347 23387090 ECH
Lele21g1868 21 26091528 26094294 Lele21g1868 21 26091528 26094294 ECH
Lele21g1868 21 26091528 26094294 Lele23g0146 23 933436 936794 hybridization
Lele21g1868 21 26091528 26094294 Lele24g1790 24 23011108 23013805 hybridization