Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1850 ATGGTTCATCAGAGTGAGAGAGTAGAGATGGCGGAGAAGTCTGAAGTACTGGATGCTGTTTTGAAGGAAGCTGTGGATTTGGCTGCTGCTATAATGGCAATAGCGCTTGCCAATGGTGGTGGTAAGCCTCCTGACTGGCAAGATTTTGTGGGTATCATTACGCTGCTTTTTATCAATTCAACTATCAGTTTCATCGAGGAGAACAATGCGGGTAATGCGGCAGCTGCTCTCATGGCTCGCCTCGCTCCAAAAGCAAAGGTTCTTCGAGATGGCAGGTGGAATGAGCAAGATGCGTCTGTTCTGGTTCCGGGTGACATAATCAGTGTCAAACTTGGGGATATTATACCAGCTGATGCACGACTACTCGAAGGGGATCCTTTGAAAATTGATCAATCTGCTCTTACTGGAGAGTCCTTGCCAGTTACTAAGGGACCTGGTGATGGTGTATATTCTGGTTCTACATGCAAACAAGGAGAGATTGAAGCTGTGGTCATCGCCACTGGTGTTCATACCTTTTTTGGGAAAGCTGCTCACCTTGTAGATACCACTAATCAAGTGGGTCACTTCCAAAAGGTGTTGACTGCAATTGGGAACTTTTGCATCTGTTCAATTGCTGTGGGGATGATTATTGAGATTATTGTGATGTATCCCATCCAAGATCGAGAATATCGCCCTGGAATTGATAACCTTCTTGTTCTTCTTATTGGAGGAATTCCAATTGCCATGCCCACCGTTCTCTCTGTGACCATGGCCATTGGTTCTCATAGGTTATCTCAGCAGGGGGCTATCACCAAGAGGATGACGGCTATTGAAGAGATGGCAGGCATGGATGTACTTTGCAGTGATAAGACTGGAACTTTAACTTTAAACAAGCTAACTGTTGACAAGAACCTTATTGAGGTTTTTGCAAAAGGAGTGCATCCAGACACTGTTGTGTTGATGGCAGCTCGAGCCTCGAGACTTGAAAATCAAGATGCAATAGATTCTGCTATTGTGGGGATGCTGGCCGATCCAAAGGAGGCTCGCGCTGGCATTCAAGAAGTACATTTTCTTCCTTTCAATCCTACTGATAAGCGGACAGCATTAACTTATATTGACCGTGATGGTAAAATGCACAGAGTGAGCAAAGGTGCACCCGAGCAGATTCTTAATCTTGCACACAATAAGTCAGACATTGAACGTAGAGTTCATGCAGTGATAGATAAGTTTGCAGAGCGTGGGTTGCGGTCTCTTGCCGTAGCATACCAGGAAGTTCCAGAAGGAACGAAGGAGAGTGCTGGCGGTCCATGGCAGTTTATTGGTCTTATGCCTCTGTTTGATCCACCTAGGCATGATAGTGCTGAAACAATACGGAGGGCACTCAACCTTGGAGTAAATGTCAAAATGATTACAGGGGATCAGCTAGCTATAGGAAAGGAAACAGGCCGCCGCTTGGGAATGGGTACCAACATGTATCCTTCATCAGCATTGCTTGGCCAGGACAAGGATGAATCCATTGCTGCTTTGCCTGTTGATGAACTGATTGAAAAAGCTGATGGATTTGCTGGTGTTTTTCCTGAGCACAAGTATGAGATTGTGAAACGCTTGCAAGCTAGGAAACATATCTGTGGAATGACTGGTGATGGAGTGAATGATGCGCCAGCCCTTAAAAAGGCAGACATTGGTATAGCTGTTGCTGATGCGACTGATGCAGCTCGTAGTGCATCTGATATTGTTTTGACTGAGCCTGGTCTTAGTGTTATCATCAGCGCTGTTTTGACTAGTCGGTCTATCTTCCAGAGAATGAAAAATTATACAATTTATGCTGTCTCAATTACAATTCGTATTGTGCTTGGTTTTATGTTACTGGCTCTTATCTGGAAGTTTGACTTCCCACCTTTCATGGTTCTCATTATCGCCATTCTGAATGATGGTACTATAATGACAATTTCAAAAGATCGAGTAAAACCATCTCCTCTGCCAGATAGCTGGAAGCTAGCAGAGATATTTACCACTGGAGTTGTACTTGGAAGTTACTTGGCAATGATGACAGTGATATTCTTTTGGGCGGCATACAAAACAGATTTCTTCCCGCGAGTATTTGGGGTCTCAACTCTTGAGAAAACAGCTCATGATGATTTCCGAAAACTTGCATCAGCAATATATCTTCAAGTGAGCACTATAAGTCAGGCCCTTATATTCGTAACTCGGTCCCGAGGTTGGTCATACGTTGAGCGTCCTGGCATACTGCTGGTAACTGCTTTTGTGATTGCTCAGCTGATTGCTACTTTGATTGCAGTCTATGCAAACTGGAGCTTTGCTGCAATTGAAGGAATAGGTTGGGGTTGGGCTGGTGTAATATGGCTATACAACATACTATTCTATATCCCACTTGATCTCCTTAAGTTCTTCATTCGCTATGCTTTGAGTGGAAGGGCTTGGGATCTTGTCATTGAACAAAGGGTTGCATTCACAAGACAAAAGGACTTTGGGAAGGAACAAAGGGAACTTCAATGGGCACATGCGCAAAGAACACTCCATGGATTACAAGCACCGGACCCCAAATTGTTCACCGAGCGCACGAATTTCCATGAACTCAATCAAATGGCCGAAGAAGCAAAAAGGAGAGCTGAAATTGCAAGGTTGAGAGAGCTGCATACACTAAAAGGTCATGTAGAATCAGTTGTAAGACTGAAGGGGCTGGACATAGAAACAATTCAGCAAGCATACACAGTCTGA 2718 0.4433 MVHQSERVEMAEKSEVLDAVLKEAVDLAAAIMAIALANGGGKPPDWQDFVGIITLLFINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWNEQDASVLVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVHPDTVVLMAARASRLENQDAIDSAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDRDGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRSIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGSYLAMMTVIFFWAAYKTDFFPRVFGVSTLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGILLVTAFVIAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNILFYIPLDLLKFFIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDPKLFTERTNFHELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1850 905 FunFam ATPase 4 plasma membrane-type 524 770 - -
Lele21g1850 905 SUPERFAMILY Calcium ATPase, transmembrane domain M 27 802 IPR023298 -
Lele21g1850 905 Gene3D - 83 167 - -
Lele21g1850 905 SFLD p-type atpase 262 590 IPR044492 -
Lele21g1850 905 CDD P-type_ATPase_H 43 796 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele21g1850 905 FunFam Plasma membrane ATPase 433 587 - -
Lele21g1850 905 SFLD Haloacid Dehalogenase 262 590 - -
Lele21g1850 905 Gene3D - 292 439 IPR023299 GO:0000166
Lele21g1850 905 ProSitePatterns E1-E2 ATPases phosphorylation site. 282 288 IPR018303 -
Lele21g1850 905 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 28 761 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele21g1850 905 SUPERFAMILY Calcium ATPase, transduction domain A 83 180 IPR008250 -
Lele21g1850 905 Pfam haloacid dehalogenase-like hydrolase 276 553 - -
Lele21g1850 905 PRINTS H+-transporting ATPase (proton pump) signature 511 527 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g1850 905 PRINTS H+-transporting ATPase (proton pump) signature 570 595 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g1850 905 PRINTS H+-transporting ATPase (proton pump) signature 539 555 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g1850 905 PRINTS H+-transporting ATPase (proton pump) signature 715 736 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g1850 905 PRINTS H+-transporting ATPase (proton pump) signature 396 414 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g1850 905 PRINTS P-type cation-transporting ATPase superfamily signature 456 466 - -
Lele21g1850 905 PRINTS P-type cation-transporting ATPase superfamily signature 539 558 - -
Lele21g1850 905 PRINTS P-type cation-transporting ATPase superfamily signature 130 144 - -
Lele21g1850 905 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Lele21g1850 905 PRINTS P-type cation-transporting ATPase superfamily signature 562 574 - -
Lele21g1850 905 PRINTS P-type cation-transporting ATPase superfamily signature 434 445 - -
Lele21g1850 905 Gene3D - 277 576 IPR023214 -
Lele21g1850 905 Pfam E1-E2 ATPase 81 259 - -
Lele21g1850 905 SUPERFAMILY HAD-like 276 586 IPR036412 -
Lele21g1850 905 FunFam Plasma membrane ATPase 292 439 - -
Lele21g1850 905 FunFam Plasma membrane ATPase 83 167 - -
Lele21g1850 905 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 52 316 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g1850 905 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 514 627 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g1850 905 Coils Coil 856 876 - -
Lele21g1850 905 PANTHER CALCIUM-TRANSPORTING ATPASE 25 838 - -
Lele21g1850 905 Gene3D - 854 905 - -
Lele21g1850 905 Gene3D - 45 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1850 Lele-ChrLele21 25987788 25993705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1850 38 905 Primary Pumps ATPases AT5G62670 94.009 0.0 1663