Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1849 ATGGATTACTATAACATACTGAAAGTGAATCGAAATGCGAGTGAGGACGATTTGAAGAAGGCGTACAAGAGGCTAGCGATGATTTGGCACCCGGATAAAAACCCAGTTAAGAAGAGGGAAGCTGAGGCCAAATTCAAGCAGATTTCCGAAGCCTATGACGTTTTGAGCGATCCCCAAAAGCGTCAGATCTACGATCTTTACGGTGAGGAGGCCCTTAAGTCTGGTCAGTTCCCGCCACCTCCGCAATCTTCCTCTTCCATGTCCTCCTCTTCTTCTCGTGCTTACCAGCATTTCCAAAACCAACAACGCCAGCATAGCAACACGTCTTATCGGTTTAATCCTAGGGACGCCGACGACATTTACGCAGAATTTTTTGGGTCGGAAAATGGTGGTGCTGGTGGCGGAGGTGGGAGAAATGGCGCGCATAGGGATGGGTTCTTTAGAACTTCAAATGGTGCGTTTGGTGGAGCGGGGAGGAAGGCTGTGGCCGTGGAGACTCTTTTGCCTTGTAGCTTGGAAGAGCTCTACAAAGGTGTCAAGAAGAAGATGAAGATCTCAAGGAATGTCTGTGACGCTTTTGGGAAGGTTCGGAATGTCGAGGAGATATTGACTATTGAGGTGAAACCTGGTTGGAAGAGAGGCACAAAGATTACTTTCCCTGAGAAGGGTAACCAGGAGCCCGGTGTCATTGCAGCAGATCTTATATTTGTGGTGGGTGAGAAACCGCATGCTGTTTATAGGAGGGATGGTAATGATCTGGTGATCGACCAAGAGATTACTCTTCTAGAATCCCTTACGGGTAAAACCCTAGACCTCATTACCTTAGATGGAAGGAATCTCATGATCCCACTGACTGATATTGTCAAACCTGGCGCTGAGGTGGTTGTCCCTAACGAGGGAATGCCCATTTCAAAAGAGCCTGGGAAGAAGGGCAATTTGAGGATTAAGTTTGAGGTTAAGTACCCTACGAGGCTAACCCCAGAGCAGAAATCGGAGCTGATAAGAGTTTTGGGTGGGAATTGA 1023 0.478 MDYYNILKVNRNASEDDLKKAYKRLAMIWHPDKNPVKKREAEAKFKQISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPPQSSSSMSSSSSRAYQHFQNQQRQHSNTSYRFNPRDADDIYAEFFGSENGGAGGGGGRNGAHRDGFFRTSNGAFGGAGRKAVAVETLLPCSLEELYKGVKKKMKISRNVCDAFGKVRNVEEILTIEVKPGWKRGTKITFPEKGNQEPGVIAADLIFVVGEKPHAVYRRDGNDLVIDQEITLLESLTGKTLDLITLDGRNLMIPLTDIVKPGAEVVVPNEGMPISKEPGKKGNLRIKFEVKYPTRLTPEQKSELIRVLGGN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1849 340 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 337 - -
Lele21g1849 340 ProSitePatterns Nt-dnaJ domain signature. 45 64 IPR018253 -
Lele21g1849 340 PRINTS DnaJ domain signature 40 60 IPR001623 -
Lele21g1849 340 PRINTS DnaJ domain signature 22 37 IPR001623 -
Lele21g1849 340 PRINTS DnaJ domain signature 4 22 IPR001623 -
Lele21g1849 340 PRINTS DnaJ domain signature 60 79 IPR001623 -
Lele21g1849 340 SMART dnaj_3 1 60 IPR001623 -
Lele21g1849 340 Gene3D - 243 323 - -
Lele21g1849 340 CDD DnaJ 2 57 IPR001623 -
Lele21g1849 340 FunFam Dnaj homolog subfamily b member 160 241 - -
Lele21g1849 340 Pfam DnaJ C terminal domain 165 322 IPR002939 -
Lele21g1849 340 Gene3D DnaJ domain 1 138 IPR036869 -
Lele21g1849 340 FunFam DNAJ heat shock family protein 242 337 - -
Lele21g1849 340 Gene3D - 162 241 - -
Lele21g1849 340 CDD DnaJ_C 164 325 - -
Lele21g1849 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 246 332 IPR008971 GO:0006457|GO:0051082
Lele21g1849 340 MobiDBLite consensus disorder prediction 72 112 - -
Lele21g1849 340 FunFam DNAJ heat shock family protein 1 137 - -
Lele21g1849 340 Pfam DnaJ domain 2 65 IPR001623 -
Lele21g1849 340 SUPERFAMILY Chaperone J-domain 1 88 IPR036869 -
Lele21g1849 340 MobiDBLite consensus disorder prediction 77 112 - -
Lele21g1849 340 ProSiteProfiles dnaJ domain profile. 2 68 IPR001623 -
Lele21g1849 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 168 243 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1849 Lele-ChrLele21 25974782 25977720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1849 3 72 C2H2 Transcription Factor Family AT1G74250 36.486 1.61e-09 57.4