Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1814 ATGTCTGCATCAGTGGTTACGCTTCGCTTGAAGCCAAAGGAGCAACAAAAAGTAGATGGCGACCGCATGTTTCTCGATTTGGATGCTCGCAACCAACGCCACCGCATAGCCTTGCGCCTCTTTCTTAAGCTTCGGCGATGTCGCAGAAGAGACGCCCCGAAGACGGCAATGCTAAATCAGAGAGTAGCAGTTCGGAGGATAAGCGCAGAAAGTGTGGTGCAAGAGGTGATCAAATTTAACTCTGTCCGGAATCTGCTGGAGCCAATTCTAGAGCCCTTGCTTCGACGAGTGGTTAAGGAAGAAGTTGAATCGGCCCTCAACAGGCATTTAATGAGCATGAAACAAGTCTGTGAGAAGGAGGTCGGTACTCCTGAATCAAGAAATTTGCTGCTGCAGTTTGAAAACAATATCTCTCCTCCCATCTTTACAGGTGCTCCAATTGAAGGGGAAGATGGCTCCAACTTACGGATAAGTTTAATTGATTCCCTGACCCGACAGGTTGTTAGTGCTGGACCTGAATCTACAGCTAAGGTGGAAATTTTAGTACTTGAGGGTGATTTTGAAGACAGAAGTGACATTTGGACGCCTGAAGAGTTTAGGAGCAACATTGTAAAAGAGAGAGATGGAAAAAAGCCTCTTCTCATGGGAGATGTATTTTTGTATCTTAACGATGGGATTGGTGTGGTGGGTAAAATTTTATTTACAGATAATTCAAGCTGGACAAGGAGCCGGAAGTTCAAGCTAGGAGCTAGAGTTGTAAGTAACTTTGATGGATTTAGAATAAAAGAAGCAAAGACAGACTCATTTATTGTCAGGGATCACCGAGGGGAATTGTACAAGAAACACCACCCTCCTAGTCTGTCTGATGAAGTCTGGAGATTAGAAAAGATTGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCAGGAAAATATCAATACTGTTGAAGATTTTCTCACACATCTCAACCTAGACTCAGCAAAGCTACGCAGTATACTGGGGACAGGTATGTCTGCAAAAATGTGGGAAGCAACAGTGGAGCATGCTCGAACGTGTGCCGATGCTCAAAGTTCAGTAACTTCTGCAATTCGACAAAAGGAGAAATTTGACTCATTCAATGATGAAGCCTCTCTGATGGAGGGTTGTTCACAATTAGACAACGTACTTTCCTCATGCTCACCCAGATCAGATGGATTCAGTGCCAACGAGCTTTTGTCTCCTCAGAAGACTGATCGATTTGATTACTTCCAAGGGAGTGCCCCCACTCCGGATATCATGTCATCTGTGTACTCTATGGGAGCTAGTGCCTTGGATGAATATTTGTTGCCCATCAGTGACAGCATGAACTTTAGATATGACCAAACGCTTGGTTTTCCAGTCCAATCTCCTAATTCTTTCATTGGTGAAACAGATACTATGACTCGTGTCTTCGATGAACAGGCTCATCATTTCTTCGATAATCCATGTCAGGCTAAGCAAGCTGAAGTATCGAGTGCTGTTTATGGCAAAGCTCAGAAGAGATGGAGAATGGTATTCAATGTCCTAAAATGGCTCCTGCTGAGAAAAAAGAAGCCAGGATTGTGA 1584 0.4413 MSASVVTLRLKPKEQQKVDGDRMFLDLDARNQRHRIALRLFLKLRRCRRRDAPKTAMLNQRVAVRRISAESVVQEVIKFNSVRNLLEPILEPLLRRVVKEEVESALNRHLMSMKQVCEKEVGTPESRNLLLQFENNISPPIFTGAPIEGEDGSNLRISLIDSLTRQVVSAGPESTAKVEILVLEGDFEDRSDIWTPEEFRSNIVKERDGKKPLLMGDVFLYLNDGIGVVGKILFTDNSSWTRSRKFKLGARVVSNFDGFRIKEAKTDSFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSQENINTVEDFLTHLNLDSAKLRSILGTGMSAKMWEATVEHARTCADAQSSVTSAIRQKEKFDSFNDEASLMEGCSQLDNVLSSCSPRSDGFSANELLSPQKTDRFDYFQGSAPTPDIMSSVYSMGASALDEYLLPISDSMNFRYDQTLGFPVQSPNSFIGETDTMTRVFDEQAHHFFDNPCQAKQAEVSSAVYGKAQKRWRMVFNVLKWLLLRKKKPGL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1814 527 PANTHER OS02G0177800 PROTEIN 59 380 IPR012416 GO:0005516
Lele21g1814 527 Pfam Calmodulin binding protein-like N-terminal domain 131 274 IPR046831 -
Lele21g1814 527 Pfam Calmodulin binding protein central domain 286 352 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1814 Lele-ChrLele21 25755661 25760303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1814 65 353 Calmodulin-binding Proteins AT5G62570 64.360 1.50e-135 396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1814 21 25755661 25760303 Lele21g1814 21 25755661 25760303 ECH
Lele21g1814 21 25755661 25760303 Lele23g0193 23 1258466 1262913 hybridization
Lele21g1814 21 25755661 25760303 Lele24g1751 24 22718210 22722888 hybridization