Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1795 ATGTCTGGGGACAAGGCTGGGTCGACGAAAACGACATATTTTATTCTGAAACAACAACATAAGGATCATGTCGCAAGACTTGGGGCTGCATGCCGCGTTTTGGTAGCATTGCAAATGTCGCCTAATAACCCAGCAACGCCATGCCTTACATCCGACAGCACCGTGTCAGGGAAAATGAGCATGTTATCTCCCAATGACACTCGCCAAATTTTCCGTCGCATATCACTACAGTCCCCTCCGGTTCCGGCGATAGCTCTCCACGATTTCTCCAAGCACATCCACCTTCGTCGCCGCCACCTCCTCACTGCGCTTACCCTCTCCTTCAACCTCATTGCGCCCTTCACAACTTCGCTGCCCATTGCAGAGCCGGTAGCCGCCGCACGCGGTCTCTTCCAGATGCCCCCATTTCGTCTCAGCAATCGGTATTTTCTGGTGAGGGCCGGAGAGTCTCAATTCGAAAACATGGGAGTGATCAACACGAACCCGGTGGCCAAGACTTCCGTCGATAGTGGATTGTCTGAAAGAGGGAAGAAGCAGGCGGTGAGAGCTGCTTTTGATCTCAAGGAAATGGGGGCTTGTGATAAGAGTTGCTGGATTTGGCCTGCCATTACTCAGAGAGCTTATCAGACTGCAGAAATTATTGCATCCGTTAATGGAGTTACTAGAAGTTTTATAGTTCCAGAATACAGCTTTCTGGATGCCCGTGGGTTGGGTGCTTATGAAGGCAAAAACTTGGAATCCATATCAGAAATATATGAATTAGATAGTGTTTCTCCAAACAGCAAACCACCTCCTGTGGATGATGGAACTCCAAATGAGAGTGTTAATGATGTTTTTGTTCGTGTAACACAACTCATGTCAATTCTTGAAACTCAGTACTCGGGTGATACCGTGGTTATAGTTTCCCCAGATTCTGACAATTTGACAATTCTTCAGGCTGGTTTGATAGGACTTGACTTGCGAAGGCACAGGGATCTGTCATTTGCGCCTGGTGAAGTCCGTTTTGTTGATGCGAAAAGCATTCCCACTTATAAGCAGCCTGCTTCTGCTGTATATAATTGTAACTAA 1068 0.4747 MSGDKAGSTKTTYFILKQQHKDHVARLGAACRVLVALQMSPNNPATPCLTSDSTVSGKMSMLSPNDTRQIFRRISLQSPPVPAIALHDFSKHIHLRRRHLLTALTLSFNLIAPFTTSLPIAEPVAAARGLFQMPPFRLSNRYFLVRAGESQFENMGVINTNPVAKTSVDSGLSERGKKQAVRAAFDLKEMGACDKSCWIWPAITQRAYQTAEIIASVNGVTRSFIVPEYSFLDARGLGAYEGKNLESISEIYELDSVSPNSKPPPVDDGTPNESVNDVFVRVTQLMSILETQYSGDTVVIVSPDSDNLTILQAGLIGLDLRRHRDLSFAPGEVRFVDAKSIPTYKQPASAVYNCN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1795 355 CDD HP_PGM_like 141 333 IPR013078 -
Lele21g1795 355 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 87 354 - -
Lele21g1795 355 Pfam Histidine phosphatase superfamily (branch 1) 143 336 IPR013078 -
Lele21g1795 355 Gene3D - 137 346 IPR029033 -
Lele21g1795 355 SUPERFAMILY Phosphoglycerate mutase-like 141 337 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1795 Lele-ChrLele21 25607738 25610587 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1795 21 25607738 25610587 Lele17g1031 17 20960988 20970011 CCT
Lele21g1795 21 25607738 25610587 Lele18g0503 18 2985795 2989542 CCT
Lele21g1795 21 25607738 25610587 Lele19g0526 19 3045137 3053578 CCT
Lele21g1795 21 25607738 25610587 Lele20g0931 20 15541531 15544756 CCT
Lele21g1795 21 25607738 25610587 Lele21g1795 21 25607738 25610587 ECH
Lele21g1795 21 25607738 25610587 Lele23g0213 23 1427161 1428873 hybridization
Lele21g1795 21 25607738 25610587 Lele24g1731 24 22577726 22582017 hybridization