Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1794 ATGAAGCAGCGAGAGTCTCGGGGTCAGTTGGAGCTTCATCAACCAAGTGACACACCAGGGTCACGCTACCATACGGCTCAGAACACACCGGACGTGCAGTGGGATAACTGTCATCATCATCAGGAGCAGCAAGTAGTTGCTCCGCCGGACGCCGTGGCAGCGGCGTTGAAGAGGGAGACGGTGGCGATGAAGACGACGGAGCTAGGGTTGAGAATGAGCGAAGTGGTTTTATGTCTAGTTTCTGCTTCGATAATGGCCACGGACAGGACCCAAGGTTGGGCAGGTGACTCCTTCGATCGCTACAAGGAATACAGGTACTGTTTAAGTGTGAATGTGATAGGGTGTGTTTACTCAGGATTTCAAGCATGTGCGAAGGCTTATCAACTCGCGTCTTCTAAAAACAAACGCTCCTCCACTCCCAGCCTCCGATCTCACTTTGATTATATCATGGATCAGGTGGTGGCGTATCTATTGGTATCAGCATCATCAAGTGCAGCGACGAGGGTGAAGGACTGGGAATCAAACTGGGGAAAAGACGACTTCACAGAGAAGGCGAGTGCTTCCATTGCAGTGGCGTTTCTGGCTTTCGTTGCCTTTGCAATTAGCTCTCTCATTTCCTTCTTCAAGCTCGGAGCTTCCATGTCATCATCTTCCGCTTGA 660 0.5091 MKQRESRGQLELHQPSDTPGSRYHTAQNTPDVQWDNCHHHQEQQVVAPPDAVAAALKRETVAMKTTELGLRMSEVVLCLVSASIMATDRTQGWAGDSFDRYKEYRYCLSVNVIGCVYSGFQACAKAYQLASSKNKRSSTPSLRSHFDYIMDQVVAYLLVSASSSAATRVKDWESNWGKDDFTEKASASIAVAFLAFVAFAISSLISFFKLGASMSSSSA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1794 219 MobiDBLite consensus disorder prediction 12 33 - -
Lele21g1794 219 MobiDBLite consensus disorder prediction 1 33 - -
Lele21g1794 219 PANTHER CASP-LIKE PROTEIN 4A4 44 210 - -
Lele21g1794 219 Pfam Casparian strip membrane protein domain 62 198 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1794 Lele-ChrLele21 25604209 25605059 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1047 17 21074103 21078241 Lele21g1794 21 25604209 25605059 CCT
Lele18g0490 18 2897134 2901344 Lele21g1794 21 25604209 25605059 CCT
Lele19g0510 19 2920001 2924134 Lele21g1794 21 25604209 25605059 CCT
Lele20g0945 20 15608108 15612983 Lele21g1794 21 25604209 25605059 CCT
Lele21g1794 21 25604209 25605059 Lele21g1794 21 25604209 25605059 ECH
Lele21g1794 21 25604209 25605059 Lele23g0214 23 1431564 1432930 hybridization