Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1793 ATGCGGAATTTTTGGTGGTCTAAACAAGTTCCGCTCAACCAGAAACTTGGGAGAAGGCTTTCGCTTGGCGAATACAAGCGAGCCGTGTCGTGGTCCAAGTATCTGGTCTCCTCTGGGGCTGCAATAAAGGAGGATGGAGAAGAGGATTGGAGCGCCGATTTGTCCAGGTTGCTCATTGGCGCCAAATTTGCCATTGGTAGTCATAGTAGGATCTATAAAGGTGTTTACAAGAACACCGAAGTGGCAATAAAGTTGATAAGTCTACCGGAGGAAGACGAAGACTTAGCTTCTTTGCTTGAGAGGCAGTTTAATTCTGAGGTTGCGATGCTCTTTCGATTGCACCATCCGAACATCATAAAGTTTGTTGCCGCTTGCAAGAAATCTCCTGTCTTCTGCATAATTACTGAATATATGCCAGGAGGATCATTGAGAAGGTACCTGCGTAGCCAAAATCCCTATTCACTCCCACCCAAACTTGTTCTGAAATTAGCCCTAGACATTGCACGGGGTATGCAATATCTTCATTCTCAGGGGATACTCCATAGGGATCTCAAATCAGAAAACCTTCTGCTAGGAGGAGATATGCGTGTGAAAGTAGCGGACTTTGGAATCTCATGCCAAGAATCTGAGAGCTTTACTACTAATGAATTCACTGGAACTTATCGTTGGATGGCACCTGAAATGTTGAGAGATAAGAATCATACCAAGAAAGCAGATGTCTACAGTTTTGGCATAGTTCTATGGGAGCTTTTAACAGCATTGACACCATATGAGAACATGACACCAGAGCAGGCAGCATTTGCAGCCTCCCAAAAGAATGTGAGGCCACCATTGCCACCTGAATGTCCATTGGCATTTAGTTGTCTGGTCACCAGATGCTGGGCAGCCAATCCAAACAAACGGCCTCACTTCGTTGAGATAGTGTCCATCTTGGAGGGCTATTCAGAATCCCTCAAGGAGGATGCAGATTTCTTCTCTAACTTCATACCATCGCCTCCTAATACTAATGTCATTAAGGAATACTTATCAGAGTGCATTTCTGGTCGTAAATCTGCTTTGTGTAATGCTTAA 1071 0.4444 MRNFWWSKQVPLNQKLGRRLSLGEYKRAVSWSKYLVSSGAAIKEDGEEDWSADLSRLLIGAKFAIGSHSRIYKGVYKNTEVAIKLISLPEEDEDLASLLERQFNSEVAMLFRLHHPNIIKFVAACKKSPVFCIITEYMPGGSLRRYLRSQNPYSLPPKLVLKLALDIARGMQYLHSQGILHRDLKSENLLLGGDMRVKVADFGISCQESESFTTNEFTGTYRWMAPEMLRDKNHTKKADVYSFGIVLWELLTALTPYENMTPEQAAFAASQKNVRPPLPPECPLAFSCLVTRCWAANPNKRPHFVEIVSILEGYSESLKEDADFFSNFIPSPPNTNVIKEYLSECISGRKSALCNA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1793 356 Pfam Protein tyrosine and serine/threonine kinase 61 311 IPR001245 GO:0004672|GO:0006468
Lele21g1793 356 CDD STKc_MAP3K-like 64 311 - -
Lele21g1793 356 SMART serkin_6 57 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1793 356 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 53 318 - -
Lele21g1793 356 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Lele21g1793 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Lele21g1793 356 Gene3D Phosphorylase Kinase; domain 1 47 138 - -
Lele21g1793 356 SUPERFAMILY Protein kinase-like (PK-like) 47 311 IPR011009 -
Lele21g1793 356 ProSiteProfiles Protein kinase domain profile. 57 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1793 356 Gene3D Transferase(Phosphotransferase) domain 1 139 340 - -
Lele21g1793 356 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Lele21g1793 356 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Lele21g1793 356 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Lele21g1793 356 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Lele21g1793 356 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1793 Lele-ChrLele21 25588859 25591421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1793 30 327 MAP Kinase Kinase Kinase AT1G62400 58.472 9.31e-127 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele21g1793 PK_Tyr_Ser-Thr 1.2e-64 CL0016