Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1782 ATGGTTCCCTCATTTTCTGTTTCACTCTCTGCCATGGATCTGGATACAAAGATCAGAGAGAACTATATCTCCCTGCAGCCAATGCTTCAGTTGCAAGAAATGGATGCAAAATCCAACGTAAAAGATCTCGAGCCTCCTTCATCATCACAGGGTAATTTCTTGCAAGATTTACTCCATATAGATCCATTTCAAGTATATGGGTCTTCATCAAATCCAGTTACTGGGGTCCAAACTGGAAATTTTGTTAACCCTTTTGATAGTTTCTCATTTGGCTGTTCGTCACCAGATTTTGATGTTTATGAGGCAAAACCATTTACTGAAAATATTAATAATGGCTATAAAGGGCATGGACATGTTATGGAGAATAATTTCCTGTTCGGAGGTAATAATAATTATAGACTCAACGTCTCTCACGAAAGGAATCAAATGGAAATGGTGGATTATGCAGACCTGAGCAATTATTATTTGCCGTTTGACTCTCAAGAAACCAAGCCTATGAATATTGTAGTACCAGATGATGAAGTCTCAATAATATCTGCAGATCATAGTTTTCTCAGAAGGGTTGGTTTGAAGAATAAGAATGGCAGGTTATCAACTTCAATCAGAAGGGCGTGCAAAGTTCGGAACAAGTCTAACGTAGTAAAGGGACAATGGACGGTAGAAGAAGATAGGCTGCTAGTTCAACTAGTTGAACAATACGGAGTGAGAAACTGGTCTCATATTGCTCTGAGTTTGCCTGGGAGAATAGGCAAACAATGCCGAGAGCGTTGGCACAATCATTTAAGGCCTAACATCAAGAAGGACACATGGAGTAATGAAGAGGATAAGATGCTGATCGAAGCACACGGAGAGATAGGAAATAAATGGGCTGAGATTGCTAAGAAGTTACCTGGAAGAACTGAAAACTCCATTAAAAACCATTGGAATGCAACCAAGAGAAGACAATATTCAAAAAGAAAGTGTCGCTCAAAGTTCCCTAAACCGTCTCTTCTTCAGGATTACATCAAGAGCTTGAACTTAGACAAAATCCCTCCCATAGATTATCGCAGAAGCAGAAGATCCTCTTCTTCTGCTAATAACCGTAACAACAGCAATACAAGGAAATTAGCATCATTAGCAACACCAGCAAGTGCACAGTTTTGTCCCGTCAATGACAGATTGGTTCCTTCATATGACGAGGTCCCAGACTTCTGTTTCGATGATGACAACATAACTTTGTTTCAAGAGGGGTACAATCTTGATTCTTTGCTTGATGATATGCCTTGTGCTTCTGATCGTACTGTGCATGGAGGGGACGATTTTGAAGCAAAGTTTCAATATTGTGGCGATGATGTCGTTGTTCATAATAATAATATTGATCTTGATGATTGTGATGATCAGTTTGATTCACAGAATGAGGAGGTGGAAGTTAAGAAGGAGATGGATTTGATGGAGATGATGTCTCAGATCAGAGATGTTCTTTGA 1464 0.3948 MVPSFSVSLSAMDLDTKIRENYISLQPMLQLQEMDAKSNVKDLEPPSSSQGNFLQDLLHIDPFQVYGSSSNPVTGVQTGNFVNPFDSFSFGCSSPDFDVYEAKPFTENINNGYKGHGHVMENNFLFGGNNNYRLNVSHERNQMEMVDYADLSNYYLPFDSQETKPMNIVVPDDEVSIISADHSFLRRVGLKNKNGRLSTSIRRACKVRNKSNVVKGQWTVEEDRLLVQLVEQYGVRNWSHIALSLPGRIGKQCRERWHNHLRPNIKKDTWSNEEDKMLIEAHGEIGNKWAEIAKKLPGRTENSIKNHWNATKRRQYSKRKCRSKFPKPSLLQDYIKSLNLDKIPPIDYRRSRRSSSSANNRNNSNTRKLASLATPASAQFCPVNDRLVPSYDEVPDFCFDDDNITLFQEGYNLDSLLDDMPCASDRTVHGGDDFEAKFQYCGDDVVVHNNNIDLDDCDDQFDSQNEEVEVKKEMDLMEMMSQIRDVL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1782 487 ProSiteProfiles Myb-like domain profile. 210 261 IPR001005 -
Lele21g1782 487 CDD SANT 269 312 IPR001005 -
Lele21g1782 487 SMART sant 214 263 IPR001005 -
Lele21g1782 487 SMART sant 266 314 IPR001005 -
Lele21g1782 487 Gene3D - 268 333 - -
Lele21g1782 487 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 266 316 IPR017930 -
Lele21g1782 487 FunFam Transcriptional activator Myb isoform A 214 267 - -
Lele21g1782 487 CDD SANT 218 261 IPR001005 -
Lele21g1782 487 PANTHER MYB PROTEIN-RELATED 191 363 - -
Lele21g1782 487 Pfam Myb-like DNA-binding domain 218 278 - -
Lele21g1782 487 MobiDBLite consensus disorder prediction 350 368 - -
Lele21g1782 487 FunFam Transcription factor MYB119 268 332 - -
Lele21g1782 487 Gene3D - 214 266 - -
Lele21g1782 487 ProSiteProfiles Myb-like domain profile. 262 312 IPR001005 -
Lele21g1782 487 MobiDBLite consensus disorder prediction 349 368 - -
Lele21g1782 487 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 210 265 IPR017930 -
Lele21g1782 487 SUPERFAMILY Homeodomain-like 212 308 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1782 Lele-ChrLele21 25495607 25497731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1782 72 430 MYB Transcription Factor Family AT4G18770 47.059 2.87e-95 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele21g1782 Myb_DNA-bind_6 1.2e-19 CL0123