Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1781 ATGCAGAGCACAGCTGTCACTCTGTCCCCTTCGCTTACTCTTCACCAACCTCACAGAGCTGTTACCTCCAATCGCTTCCATTCTACACATTTCTCTCTCTCTGCTTCCTCTTCCAAGCCCTGTGAAAGCTCCTCGTCGTTCCATCGCCGCTATTGGTCCGTTGCTTCTTCTTCCTACTCCTCTTCCTCCTTTAAGTTCAGGCCCTCGACATCTTTGCTCACTCCTGCTTCCTCTGATTCTGATGCCACTCGCTTTGAGGCCCGGGCCACTTCTGTGCCTGACAGCGCGGATGAGAGTTCCAACGCCTTATTCAAAACTCTGCAGCTTGGATCCTTGTTTGGCCTCTGGTACCTCTTCAATATATACTTTAATATCTACAATAAGCAGGTCTTGAAGGTGTACCAGTTTCCAGTAACTGTCACTGCAATTCAATTTGCTGTCGGGACTGTCCTTGTCTTATTTTTATGGACTTTTAATCTCCATAAAAGGCCAAAAATAAGTGGTTCCCTGCTTGCAGCTATACTGCCTTTGGCTATGGTACATACTTTAGGGAACCTTTTCACTAACATGAGCCTTGGAAAGGTAGCGGTGTCGTTCACTCATACTATCAAAGCAATGGAGCCTTTCTTTTCAGTGGTCCTTTCTGCCATATTCCTTGGAGAGATGCCAACTGCGTTGGTGGTCGCTTCACTTTTGCCTATTGTTGGTGGAGTGGCACTGGCATCTATCACTGAGGCCTCCTTTAATTGGGCTGGATTTGGGAGTGCAATGGCATCTAATTTGACATTTCAGTCTCGTAATGTTCTCAGCAAGAAGGTCATGGTTAATAAAGAGGAAACAATGGACAATATAAACCTCTTCTCAACAATAACTGTCATATCCTTCTTTTTATTAGCACCAGTGGCTATCTTCATGGAAGGCGTCAAATTTACCCCTGCATACCTGCAATCTGCTGGGTTAAATGTTAAACAGTTATACACCAGATCTCTTATTGCTGCACTCTGTTTCCATGCATATCAACAAGTTTCTTATATGATATTGCAGAGGGTTTCACCTGTTACCCACTCCGTGGGCAACTGCGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTCCTCTTCTTCAAAACACCCGTATCACCTGTTAACGCTTTAGGCACTGGTATAGCTCTTGCCGGAGTGTTCCTTTATTCAAGGGCAAAGCGAATTAAGCCAAAGCCGAGGACAGCTTAA 1230 0.4545 MQSTAVTLSPSLTLHQPHRAVTSNRFHSTHFSLSASSSKPCESSSSFHRRYWSVASSSYSSSSFKFRPSTSLLTPASSDSDATRFEARATSVPDSADESSNALFKTLQLGSLFGLWYLFNIYFNIYNKQVLKVYQFPVTVTAIQFAVGTVLVLFLWTFNLHKRPKISGSLLAAILPLAMVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAIFLGEMPTALVVASLLPIVGGVALASITEASFNWAGFGSAMASNLTFQSRNVLSKKVMVNKEETMDNINLFSTITVISFFLLAPVAIFMEGVKFTPAYLQSAGLNVKQLYTRSLIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVLFFKTPVSPVNALGTGIALAGVFLYSRAKRIKPKPRTA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1781 409 PANTHER SOLUTE CARRIER FAMILY 35 108 401 - -
Lele21g1781 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 294 401 - -
Lele21g1781 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 152 243 - -
Lele21g1781 409 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 107 407 IPR004696 GO:0016020|GO:0022857|GO:0055085
Lele21g1781 409 Pfam Triose-phosphate Transporter family 107 397 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1781 Lele-ChrLele21 25490478 25493579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1781 1 409 Antiporters AT5G33320 68.193 0.0 523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1060 17 21145261 21148227 Lele21g1781 21 25490478 25493579 CCT
Lele18g0479 18 2816016 2818970 Lele21g1781 21 25490478 25493579 CCT
Lele19g0499 19 2857250 2860216 Lele21g1781 21 25490478 25493579 CCT
Lele20g0957 20 15676852 15679818 Lele21g1781 21 25490478 25493579 CCT
Lele21g1781 21 25490478 25493579 Lele22g1757 22 22830211 22833329 ECH
Lele21g1781 21 25490478 25493579 Lele21g1781 21 25490478 25493579 ECH
Lele21g1781 21 25490478 25493579 Lele23g0226 23 1550192 1557436 hybridization