Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1774 ATGTTACTCTCACTACTGTTCTGCACATTCTTCAGGGCAAACTCATGGCACGTAGAATTCCGTTTCGGATTTGATTCTTCTCAGTGTACTGATGAAGGTACTGGATCATCCGAGGGTGGCATCAGTAAGGAAGAGAGAGAAGAAAACGAGTCCAAGATAATCACTGAGGATCGAGAGTTGAAGGACAAACTTCTTCGTAGATATAGCGGATATATTATTGGTCTAAAGCATGAATTTTCCAAAAAGAAGAAGAAGGAGAAGCTACCCAAAGAAGCGAGACAAATATTGCTTGCATGGTGGAATATTCACTTCAAATGGCCGTACCCGACGGAAGCGGATAAGGTTGCATTAGCTGAATGGACAGGTCTGGATCAAAAGCAGATAAACAATTGGTTCATAAACCAAAGGAAGCGCCATTGGAAGCCAACAGAGGAAATGCAAGCAGCAGTTTTCGATGGCCTCTATGGACCCTTTTACACCAGTGATTGA 489 0.4294 MLLSLLFCTFFRANSWHVEFRFGFDSSQCTDEGTGSSEGGISKEEREENESKIITEDRELKDKLLRRYSGYIIGLKHEFSKKKKKEKLPKEARQILLAWWNIHFKWPYPTEADKVALAEWTGLDQKQINNWFINQRKRHWKPTEEMQAAVFDGLYGPFYTSD 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1774 162 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 49 148 - -
Lele21g1774 162 ProSiteProfiles 'Homeobox' domain profile. 79 142 IPR001356 GO:0003677
Lele21g1774 162 Gene3D - 76 150 - -
Lele21g1774 162 ProSitePatterns 'Homeobox' domain signature. 117 140 IPR017970 GO:0000981|GO:0006355
Lele21g1774 162 SMART ELK_2 59 80 IPR005539 GO:0003677
Lele21g1774 162 Pfam ELK domain 59 80 IPR005539 GO:0003677
Lele21g1774 162 SUPERFAMILY Homeodomain-like 80 154 IPR009057 -
Lele21g1774 162 SMART HOX_1 81 146 IPR001356 GO:0003677
Lele21g1774 162 MobiDBLite consensus disorder prediction 29 52 - -
Lele21g1774 162 MobiDBLite consensus disorder prediction 38 52 - -
Lele21g1774 162 ProSiteProfiles ELK domain profile. 59 79 IPR005539 GO:0003677
Lele21g1774 162 CDD homeodomain 93 142 IPR001356 GO:0003677
Lele21g1774 162 Pfam Homeobox KN domain 99 138 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1774 Lele-ChrLele21 25444290 25445112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1774 29 160 Homeobox Transcription Factor Family AT1G23380 58.451 6.53e-47 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele21g1774 Homeobox_KN 3.6e-16 CL0123