Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1766 ATGCCTGAAAATCCATGGACTACCCTCTTCTTCCTAGTAACCGCACTTTTACTTCATTCCCAACATTCTTTTATTGCTTCTTCTGCTGCTGTTAACCCACAAGGGCAAGCTCTTCTTTCATGGAAGACAACATCCCTGAACGGGTCCTTGGAGGTTCTGAGTAATTGGGACCCGATTGACGAAACTCCATGTGCCTGGTTTGGAGTTAGCTGCAACTTGAAGAACGAGGTTGTGCAATTAGATCTGAGGTACGTTGATTTGCTTGGAAGCGTTCCTTCTAATTTCACCTCATTGAGTTCCTTGACCAAGCTTATCCTTATTGGAACGAACCTCACTGGTTCTATCCCAAAAGAGATAGGCTTTCTTAGCAATCTCACCTACTTGGACTTGAGTGACAATGCCTTGACTGGTGAGATCCCAAGTGAGCTTTGCTTTTTGCCTCAGCTTCAAGAACTCCATCTCAACTCAAACCAGCTTGAAGGGTCGATTCCAATTGCAATTGGGAATCTCACAAAGTTGGAGTGGCTGATCTTATATGATAATCAGCTAAGTGGTGAAATTCCCACCACGATAGGAAATATGAAGAATCTGCAAGTGATTCGAGCTGGTGGAAACAAGAACCTTGAAGGTGCTTTGCCTCATGAAATAGGGAACTGTACAAAATTGGTCATGTTGGGTTTAGCTGAAACAAGTATCTCGGGATTTCTTCCTCCAACTCTTGGCCTACTCAAGAAGCTGAACAGTATTGCAATTTATACTTCCCTCCTCTCTGGCCAGATTCCTCCTGAACTCGGTGACTGCACTGAACTTGAGAACATTTATTTGTACGAGAACTCCCTAACTGGATCATTACCTAGCAGATTGGGAAATCTTAGGAATCTCAAGAATCTTCTTTTATGGCAGAACAATTTAGTTGGCACCATCCCACCAGAAATTGGAAATTGCTACCAGTTATCTGTCATTGACATCTCAATGAACTCGCTTACAGGAAGCATTCCCAAGAGTTTTGGAAATCTGACGGCTTTGGAAGAACTTCAGCTTAGCGAAAACCAGATTTCAGGGGAGATTCCTGCAGAGCTAGGGAACTGCGAGCAACTCACTCACATCGAGCTGGACAACAATCAAATCTCGGGGACGATACCTTCTGAATTCGGAAACCTTAGTAATCTGACGTTGTTGTTCCTGTGGAATAATAAGCTCGACGGAAATATACCATATTCACTTTCCAATTGCCAAAACCTCGAGGCTGTGGATCTGTCACAGAATGCACTTACTGGTCCCATACCGAAGGGGATATTCGAGCTCAAGAATCTCAACAAGCTCTTGCTACTTTCTAATAATCTCTACGGAAGTATTCCATCTGAAATTGGTAATTGTTCGTCTTTGATTCGGTTCCGAGTGAGCAAAAATAAGATCACAGGGAGCATACCCCCACAGATTGGGAATCTAAGAAACTTGAACTTTTTGGATCTTGGATACAATCGGATTTCCGGAGTCATTCCGGAAGAGATGTCAGGCTGCAGGAATCTCACGTTTTTGGACCTACATTCCAATATAATCGCCGGAAGCTTGCCGGAGAGTCTGAGTGAGCTTGTTCCGCTTCAATTTATCGACTTCTCTGATAACATGATCGAAGGTACGCTGAGTCCGAGACTAGGATCGCTTGGTTCAATCACAAAATTTATTCTCGGAAAGAATCGTATCTCTGGATCAATTCCGAGTCAACTCGGTTCCTGTTCGAAGCTTCAGTTGCTGGATCTTAGTAGCAACAATTTCTCCGGCAATATCCCCGGTAGTCTTGGTAATATTCCGGCGCTTGAAATTGCACTGAATCTGAGCTTGAATAAACTTTCCGGCGAGATTCCTCAGGAGTTTTCAGCCTTGGCTAAGCTGGGGATCTTAGACATTTCCCACAACGAGCTTATCGGCAACCTTCATTATCTCGCGGACCTCCAAAATCTCGTCGTCCTCAATATCTCGTACAACAAATTCTCCGGACGCATCCCGGACGCGCCTTTCTTTGCAAAGCTTCCTTTAAATATGCTCGCCGGCAACCCATCGCTCTGCCTTTCCGTAAACCGATGCGACGAAGACGATTCTGGAAGCCGTTCAGGAAGGCGTGCGACGACGGCGCGTATAGCTATGGTGGTTCTACTTTGCACTGCATGTGCTCTGCTCTTGGCGGCGCTGTACGTCGTCTTCGCGGCAAAACAACGACAGAGGGGCCACGGTAACGATCTCGACCTCGACGGGAGGGGTAGCGACCTAGAGATGGGCCCACCATGGGAGGTGACAGTGTACCAGAAGCTGGACCTGTCAATTTCCAACGTGGCAAACTGTCTCACCGCTGGAAACGTCATCGGGCGGGGACGATCCGGGGTGGTTTACAGAGTGAACCTGCCAGCGGGAATAGAAATGGCTGTGAAGAGGCTCCGGTCGTCGGAGAAATTCTCGGTGGCAGCTTTTTCGTCGGAGAGAACGACACTGGCGAGAATACGACACCGTAACATAGTGAGGCTATTGGGTTGGGCGGCGAACCAGAAGGCGAAGTTACTGTTTTATGATTATTTACCAAACGGTAATCTGGATACGCTTTTACACGAAGGGTGCACAGGATTGATCGAGTGGGAGACACGGTTCAAGATAGCGCTGGGTGTGGCGGAAGGCTTAGCGTACCTGCATCATGACTGTGTGCCTGCTATCTTGCACCGGGATGTAAAAGCGCACAACATTTTGTTAGGAGACAGGTACGAGCCGTGTCTCGCAGATTTTGGTTTTGCCAGATTTGTACAAGAAGATCAAGCTTCCTTCTCCGTCAATCCTCAATTCGCTGGTTCTTACGGCTACATTGCGCCGGAGTATGGGTGCATGTTGAAGATAACAGAGAAGAGCGACGTGTATAGCTACGGAGTGGTACTGTTAGAGATAATCACCGGGAAACGACCCGTGGACACGTCGTTCGGTGAGGGGCTACATGTGATAGATTGGGTGAGAGATCATCTGAAGAAGAAGAAGGACCCTGTGGAGATTGTTGATCCCAAGCTTCAAGGCCACACAGACACACACATCCAAGAGATGCTTCAAGCACTCGGCATCTCCCTCCTCTGTACCAGCACTCGCCCCGTTGACCGTCCCAACATGAAAGACGTCGCCGCCTTGCTCCGAGAAATCCGCCACGACTCTCCCGCCGGCCACGACGCCCACAAGCCCACCACCACCACCAACTCTTCTTCCTCCTCCTCTGTCACTCCCGCTCAGTTGTTGCTTCTTGATCGTCCTTCGTCTCATTCTTCGTCGCTTGCTTATTCTTCTTCTACTGTACAAGGCAGGATGTCCTGTTCCTAA 3345 0.478 MPENPWTTLFFLVTALLLHSQHSFIASSAAVNPQGQALLSWKTTSLNGSLEVLSNWDPIDETPCAWFGVSCNLKNEVVQLDLRYVDLLGSVPSNFTSLSSLTKLILIGTNLTGSIPKEIGFLSNLTYLDLSDNALTGEIPSELCFLPQLQELHLNSNQLEGSIPIAIGNLTKLEWLILYDNQLSGEIPTTIGNMKNLQVIRAGGNKNLEGALPHEIGNCTKLVMLGLAETSISGFLPPTLGLLKKLNSIAIYTSLLSGQIPPELGDCTELENIYLYENSLTGSLPSRLGNLRNLKNLLLWQNNLVGTIPPEIGNCYQLSVIDISMNSLTGSIPKSFGNLTALEELQLSENQISGEIPAELGNCEQLTHIELDNNQISGTIPSEFGNLSNLTLLFLWNNKLDGNIPYSLSNCQNLEAVDLSQNALTGPIPKGIFELKNLNKLLLLSNNLYGSIPSEIGNCSSLIRFRVSKNKITGSIPPQIGNLRNLNFLDLGYNRISGVIPEEMSGCRNLTFLDLHSNIIAGSLPESLSELVPLQFIDFSDNMIEGTLSPRLGSLGSITKFILGKNRISGSIPSQLGSCSKLQLLDLSSNNFSGNIPGSLGNIPALEIALNLSLNKLSGEIPQEFSALAKLGILDISHNELIGNLHYLADLQNLVVLNISYNKFSGRIPDAPFFAKLPLNMLAGNPSLCLSVNRCDEDDSGSRSGRRATTARIAMVVLLCTACALLLAALYVVFAAKQRQRGHGNDLDLDGRGSDLEMGPPWEVTVYQKLDLSISNVANCLTAGNVIGRGRSGVVYRVNLPAGIEMAVKRLRSSEKFSVAAFSSERTTLARIRHRNIVRLLGWAANQKAKLLFYDYLPNGNLDTLLHEGCTGLIEWETRFKIALGVAEGLAYLHHDCVPAILHRDVKAHNILLGDRYEPCLADFGFARFVQEDQASFSVNPQFAGSYGYIAPEYGCMLKITEKSDVYSYGVVLLEIITGKRPVDTSFGEGLHVIDWVRDHLKKKKDPVEIVDPKLQGHTDTHIQEMLQALGISLLCTSTRPVDRPNMKDVAALLREIRHDSPAGHDAHKPTTTTNSSSSSSVTPAQLLLLDRPSSHSSSLAYSSSTVQGRMSCS 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1766 1114 Gene3D Phosphorylase Kinase; domain 1 764 856 - -
Lele21g1766 1114 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 520 596 - -
Lele21g1766 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 857 1072 - -
Lele21g1766 1114 PRINTS Leucine-rich repeat signature 628 641 - -
Lele21g1766 1114 PRINTS Leucine-rich repeat signature 125 138 - -
Lele21g1766 1114 ProSitePatterns Protein kinases ATP-binding region signature. 787 809 IPR017441 GO:0005524
Lele21g1766 1114 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 430 519 - -
Lele21g1766 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 206 429 - -
Lele21g1766 1114 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Lele21g1766 1114 MobiDBLite consensus disorder prediction 1067 1083 - -
Lele21g1766 1114 ProSiteProfiles Protein kinase domain profile. 781 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1766 1114 Gene3D Ribonuclease Inhibitor 31 186 IPR032675 -
Lele21g1766 1114 MobiDBLite consensus disorder prediction 1095 1114 - -
Lele21g1766 1114 Gene3D Ribonuclease Inhibitor 287 365 IPR032675 -
Lele21g1766 1114 ProSiteProfiles Leucine-rich repeat profile. 124 147 IPR001611 GO:0005515
Lele21g1766 1114 SUPERFAMILY L domain-like 34 305 - -
Lele21g1766 1114 Gene3D Ribonuclease Inhibitor 366 608 IPR032675 -
Lele21g1766 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 31 205 - -
Lele21g1766 1114 Pfam Leucine rich repeat 317 376 IPR001611 GO:0005515
Lele21g1766 1114 Pfam Leucine rich repeat 464 518 IPR001611 GO:0005515
Lele21g1766 1114 Pfam Leucine rich repeat 123 183 IPR001611 GO:0005515
Lele21g1766 1114 SMART LRR_typ_2 146 169 IPR003591 -
Lele21g1766 1114 SMART LRR_typ_2 435 459 IPR003591 -
Lele21g1766 1114 SMART LRR_typ_2 122 144 IPR003591 -
Lele21g1766 1114 SMART LRR_typ_2 555 579 IPR003591 -
Lele21g1766 1114 SMART LRR_typ_2 339 363 IPR003591 -
Lele21g1766 1114 SMART LRR_typ_2 387 411 IPR003591 -
Lele21g1766 1114 SMART LRR_typ_2 291 315 IPR003591 -
Lele21g1766 1114 SMART LRR_typ_2 483 507 IPR003591 -
Lele21g1766 1114 SMART LRR_typ_2 170 194 IPR003591 -
Lele21g1766 1114 SMART LRR_typ_2 651 675 IPR003591 -
Lele21g1766 1114 FunFam Putative LRR receptor-like serine/threonine-protein kinase 609 694 - -
Lele21g1766 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 901 913 IPR008271 GO:0004672|GO:0006468
Lele21g1766 1114 Gene3D Ribonuclease Inhibitor 187 286 IPR032675 -
Lele21g1766 1114 Gene3D Ribonuclease Inhibitor 609 696 IPR032675 -
Lele21g1766 1114 Gene3D Transferase(Phosphotransferase) domain 1 857 1079 - -
Lele21g1766 1114 SUPERFAMILY RNI-like 272 646 - -
Lele21g1766 1114 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 445 1055 - -
Lele21g1766 1114 Pfam Protein kinase domain 784 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1766 1114 SMART serkin_6 781 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1766 1114 SUPERFAMILY Protein kinase-like (PK-like) 767 1054 IPR011009 -
Lele21g1766 1114 MobiDBLite consensus disorder prediction 1060 1083 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1766 Lele-ChrLele21 25388345 25392833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1766 30 1107 Receptor kinase-like Gene Family AT5G56040 53.033 0.0 1096
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele21g1766 Pkinase 4e-40 CL0016