Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1754 ATGGGTCGCCATTCCTGTTGTGTAAAGCAAAAACTGAGAAAGGGCCTGTGGTCCCCTGAAGAAGATGAGAAGCTCTTCAATTACATTTCCAGATATGGCGTTGGCTGCTGGAGTTCTGTTCCCAAACTCGCTGGGTTGCAAAGATGTGGAAAGAGTTGCAGACTGAGATGGATTAATTATCTGAGGCCTGATTTGAAGAGAGGCACGTTTTCTCAACAAGAAGAAGATCTTATCATCAGCCTTCATCAAGTTCTTGGCAATAGGTGGGCTCAGATAGCGGCACAGTTACCAGGAAGAACAGATAATGAGATAAAGAACTTCTGGAATTCAAGTCTGAAGAAGAAGCTGCTGAAGCAAGGGATTGATCCAACCACACACAAGCCTCTAATTCTTACAGAATCATCAATAAAGGAGGAGAAGAAAATTCTCACATCAGATTCATCTCTGCAGATTCCATTCTCAGTCTCAGCTCCGACAACAACATCCTTAGGCTTCTCATCATCATCACTCGCAGGAAGCGATAATTCCAACAAGTTCGAGAATAACATTAACGGTTATGACCCGTTGGCCTTATTTGAGTTCCAAATGGCCGGTTTGAACCAATCTGGGTTCGGATTCAACATGTCCTCGATAATGCCAGGTCTGATAAATTCAATGACGGCGGAGTTATCATCGGAAAACAATTCGGGTTCGAGAATCAGTTCAAGCAGCTTGAGCAGTTATGTTCAAGGAGGAGGGGGTCATCAGATAAGTGACAGCAGCTTAATGACGATGGATCCATTCTTGTATCAGTTTCAAGCAGTGAATGGTATGAAGATCGAAGACGATGGTTATCAGACGTTGATGAAGACGACGACGACGTCGTCGTGGGAAGATTGTGGCAGCCAGATTCTCAATCAAAGCTCCATAGATTTCACCGCCACCTATCCGTTAACGTCACTGTCAGAAGATCTAACACCCGCGAATTTTGATGCTTTCCATAACCATATGTTGTGA 996 0.4408 MGRHSCCVKQKLRKGLWSPEEDEKLFNYISRYGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGTFSQQEEDLIISLHQVLGNRWAQIAAQLPGRTDNEIKNFWNSSLKKKLLKQGIDPTTHKPLILTESSIKEEKKILTSDSSLQIPFSVSAPTTTSLGFSSSSLAGSDNSNKFENNINGYDPLALFEFQMAGLNQSGFGFNMSSIMPGLINSMTAELSSENNSGSRISSSSLSSYVQGGGGHQISDSSLMTMDPFLYQFQAVNGMKIEDDGYQTLMKTTTTSSWEDCGSQILNQSSIDFTATYPLTSLSEDLTPANFDAFHNHML 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1754 331 SMART sant 66 114 IPR001005 -
Lele21g1754 331 SMART sant 13 63 IPR001005 -
Lele21g1754 331 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele21g1754 331 FunFam Transcription factor MYB86 69 139 - -
Lele21g1754 331 Gene3D - 69 144 - -
Lele21g1754 331 PANTHER MYB DOMAIN PROTEIN 55 1 239 - -
Lele21g1754 331 CDD SANT 17 61 IPR001005 -
Lele21g1754 331 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele21g1754 331 FunFam MYB transcription factor 11 67 - -
Lele21g1754 331 Gene3D - 11 67 - -
Lele21g1754 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lele21g1754 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lele21g1754 331 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele21g1754 331 CDD SANT 69 112 IPR001005 -
Lele21g1754 331 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Lele21g1754 331 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1754 Lele-ChrLele21 25293167 25294353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1754 1 174 MYB Transcription Factor Family AT1G57560 68.391 7.36e-81 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele21g1754 Myb_DNA-binding 1.8e-14 CL0123