Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1752 ATGATATATTACTTTGAAAATTCATTTGCAACTCTAAAGTGCATTTTCTTGATATGTTACCTCAGTAGAGAGCATGAGTTCTTGTTGTATTATTTCAACAAGGTTGCAAATTCATTTCTATTTTTAGTTGAAAAGAATGATTATGGACAGCTTCAATTGTTAGACAGGAAGCAGGAGACACAGGCAGAAGCAGGGAAGATGACGACGAGGTTCAAGAAGAACAGAAAGAAGAGAGGGCATGTGAGCGCTGGCCATGGTCGTATTGGAAAACACAGGAAGCATCCGGGAGGTCGTGGTAACGCTGGAGGTATGCACCACCACCGAATCCTCTTCGATAAATACCATCCTGGTTATTTCGGTAAGGTTGGCATGCGATACTTTCACAAGCTTCGCAACCAATTCTACTGCCCCATTGTCAACATAGACAAACTGTGGTCCTTAGTTCCTCAAGAAGCGAAGGATAAGGCTTCCAAGGATAACGCTCCGTTGATCGATGTCACTCAGTTTGGATACTTCAAGGTGTTGGGCAAAGGGGTTTTGCCTGAGAATAAGCCCGTCGTCGTAAAGGCCAAACTCGTGTCCAAGATTGCTGAGAAGAAGATCAAGGAAGCGGGAGGTGCTGTTGTCCTCACTGCTTAG 639 0.4429 MIYYFENSFATLKCIFLICYLSREHEFLLYYFNKVANSFLFLVEKNDYGQLQLLDRKQETQAEAGKMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNQFYCPIVNIDKLWSLVPQEAKDKASKDNAPLIDVTQFGYFKVLGKGVLPENKPVVVKAKLVSKIAEKKIKEAGGAVVLTA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1752 212 MobiDBLite consensus disorder prediction 71 100 - -
Lele21g1752 212 SUPERFAMILY Ribosomal proteins L15p and L18e 72 211 IPR036227 -
Lele21g1752 212 PANTHER 60S RIBOSOMAL PROTEIN L27A 67 212 - -
Lele21g1752 212 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 94 209 IPR021131 -
Lele21g1752 212 Gene3D - 124 212 - -
Lele21g1752 212 Hamap 50S ribosomal protein L15 [rplO]. 67 211 IPR030878 GO:0003735|GO:0006412|GO:0015934
Lele21g1752 212 ProSitePatterns Ribosomal protein L15 signature. 173 205 IPR001196 GO:0003735|GO:0005840|GO:0006412
Lele21g1752 212 FunFam 60S ribosomal protein L27a 124 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1752 Lele-ChrLele21 25275530 25276832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1752 67 212 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 89.041 1.25e-95 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1752 21 25275530 25276832 Lele17g1079 17 21274428 21276068 CCT
Lele21g1752 21 25275530 25276832 Lele18g0462 18 2678778 2679444 CCT
Lele21g1752 21 25275530 25276832 Lele19g0482 19 2717713 2719348 CCT
Lele21g1752 21 25275530 25276832 Lele20g0974 20 15814252 15814916 CCT
Lele21g1752 21 25275530 25276832 Lele22g1727 22 22624742 22625182 ECH
Lele21g1752 21 25275530 25276832 Lele21g1752 21 25275530 25276832 ECH
Lele21g1752 21 25275530 25276832 Lele23g0255 23 1777958 1778287 hybridization
Lele21g1752 21 25275530 25276832 Lele24g1693 24 22284997 22285437 hybridization