Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1751 ATGAACCCTTACGACAACAGATATACAGACTCCACTTCTTATCGCAACCGCAGGAGTGATTTAATTGGATCTGTGCCGCCGATGGTCCCTCCAACGATTGGCGGTGCCAGCTCGAGCTACAGCCGGGGAGGTCCTGCTTCTTATGGTCCTCCACCGGTTGGTTATAACGGGGGTGGAAGAGGTGCCGGGAGTGCTTTCAGAACGGCAACTGTTGCCCCAAATTATAATGAGTTGTCGCCGTTCATGCCGCCTCCTGGAGGCTTTGACATAGGTCGCGGTGGGGGCTTGGTCGGTAGACTTGGAAACGGTCACGTTGGTGATAGAAAAGATGACGTAGGTCGTCGCGTTAGTGGAACAGATCGGGGTAGCAGTTTGACTGGAGGTCGGTTAGGTGGTAGATTTGGTGGAGCTCACGGAGACAGGACCTCGGGGAGAGGAAGGGGGGCTGGAGGTAGAGGTTTCGGTGGAAGCTCGCGATTTGGAGGTAGCCGTGGCCGTGGTGATGATGGTGGTGGTAGAGGAGGAAGACACGATGGATCTTCCAAGGATGACTTGGACAACATAGCACTTCCCAAGCAAGATTTTAGAAATTTGGTTCCCTTTGAGAAGAATTTTTACATTGAGAGCCCATCGGTGCGGGCGATATCTGATCATGAACTTACGGTTTACCGTGCCACTAGGGAGATCACAGTGCAAGGGCATGATATTCCTAAACCGATTCGAACGTTCCAAGATGCAAATTTTCCTGATTACTGCCTTGAGGTGATTGCCAAATTGGGTTTTTTGGAGCCTACACCAATTCAGGCTCAAGGTTGGCCCATGGCTCTGAAGGGTAGAGATTTGATTGGCATTGCTGAGACTGGCTCAGGAAAAACACTCGCGTATCTGCTTCCTGCTTTAGTGCATATCAGTGCACAACCTCGATTGGTACAAGGTGAAGGTCCCATTGTTTTAGTTCTGGCACCAACTAGAGAGTTAGCTGTTCAAATTCAGGAAGAAGCTGTAAAATTTGGTTCTCGAGCAAATATTAGAAGTACTTGTATCTATGGCGGTGCCCCAAAGGGACCTCAAATTCGTGATCTTAAAAGAGGTGTTGAAATTGTTATTGCCACACCTGGTCGCCTTATAGATATGTTGGAAGCTCAGCATACAAATTTACGAAGAGTGACTTACCTTGTGTTGGATGAAGCTGATCGAATGTTGGACATGGGCTTTGAACCTCAGATAAGAAAAATTATTGGGCAGATCCGGCCTGATAGACAGACATTGTACTGGAGTGCAACATGGCCAAGAGAGGTTGAAACTCTGGCAAGGCAGTTTCTACGCAATCCATATAAGGTAATTATTGGATCACCAGATTTGAAAGCAAATCAATCTATAAATCAAGTTGTTGAAGTTTTAACAGAAGTGGAGAAATACAATAGATTGATCAAACTGCTTAAAGAAGTGATGGATGGGAGTCGAATTCTTATATTTATTGAGACAAAAAAGGGTTGTGATCAAGTTACAAGACAATTGAGAATGGATAGCTGGCCTGCACTTTCTATCCATGGTGATAAAAACCAGGCTGAAAGGGACTGGGTCTTGGCTGAATTTAAGAGTGGCAGAAGTCCAATAATGACTGCCACTGATGTTGCTGCACGGGGTCTTGTTAGGGAGCTGGTTGTCTCTGCAGCCTGGTTGACTCATGCATGCTTAGTGGATAATTGGATATGGGAGGTGGAAATGATGGTGAAGCTGCTCCTTATCCCTGCAAAGTTAAGGTGGGCACATTTATGTGATGAATGTGTTGACTTTGAGTTTGATCTCCATAATCTTAGGGATGTGAAGGACATAAAATTTGTGATCAATTATGATTTTCCCTCAAGCCTGGAAGATTATGTCCACAGAATTGGTCGAACAGGTCGTGCAGGGGCTAAAGGAACTGCCTTCACCTTTTTCACGCATGCAAATGTCAAGTTTGCCAGGGATTTGATCAAGATCTTGCAAGATGCTGGCCAGGTTGTGAGTCCTGCTCTATCTGCCTTGTCTCGGTCAGCTGGTTCTGGTCAATTTGGATCTGGGGGAAACTTCCGCTCCAAGGGACGGGGAGGTTATGGGAATCGAGGTCACATATCAGGATCCAATATCATTCCTCTGGGTTCAAGGAAGCCTTGGTAG 2160 0.4657 MNPYDNRYTDSTSYRNRRSDLIGSVPPMVPPTIGGASSSYSRGGPASYGPPPVGYNGGGRGAGSAFRTATVAPNYNELSPFMPPPGGFDIGRGGGLVGRLGNGHVGDRKDDVGRRVSGTDRGSSLTGGRLGGRFGGAHGDRTSGRGRGAGGRGFGGSSRFGGSRGRGDDGGGRGGRHDGSSKDDLDNIALPKQDFRNLVPFEKNFYIESPSVRAISDHELTVYRATREITVQGHDIPKPIRTFQDANFPDYCLEVIAKLGFLEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHISAQPRLVQGEGPIVLVLAPTRELAVQIQEEAVKFGSRANIRSTCIYGGAPKGPQIRDLKRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSPDLKANQSINQVVEVLTEVEKYNRLIKLLKEVMDGSRILIFIETKKGCDQVTRQLRMDSWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLVRELVVSAAWLTHACLVDNWIWEVEMMVKLLLIPAKLRWAHLCDECVDFEFDLHNLRDVKDIKFVINYDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHANVKFARDLIKILQDAGQVVSPALSALSRSAGSGQFGSGGNFRSKGRGGYGNRGHISGSNIIPLGSRKPW 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1751 719 MobiDBLite consensus disorder prediction 1 45 - -
Lele21g1751 719 Pfam Helicase conserved C-terminal domain 471 638 IPR001650 -
Lele21g1751 719 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 393 401 IPR000629 -
Lele21g1751 719 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 241 269 IPR014014 GO:0003724
Lele21g1751 719 Gene3D - 453 679 IPR027417 -
Lele21g1751 719 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 475 677 IPR001650 -
Lele21g1751 719 Gene3D - 214 452 IPR027417 -
Lele21g1751 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 225 449 IPR027417 -
Lele21g1751 719 MobiDBLite consensus disorder prediction 99 187 - -
Lele21g1751 719 MobiDBLite consensus disorder prediction 103 117 - -
Lele21g1751 719 MobiDBLite consensus disorder prediction 1 19 - -
Lele21g1751 719 CDD DEADc_DDX5_DDX17 253 447 - -
Lele21g1751 719 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 215 676 - -
Lele21g1751 719 SMART ultradead3 260 463 IPR014001 -
Lele21g1751 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 476 654 IPR027417 -
Lele21g1751 719 MobiDBLite consensus disorder prediction 679 703 - -
Lele21g1751 719 FunFam probable ATP-dependent RNA helicase DDX17 203 450 - -
Lele21g1751 719 SMART helicmild6 500 638 IPR001650 -
Lele21g1751 719 CDD SF2_C_DEAD 460 647 - -
Lele21g1751 719 MobiDBLite consensus disorder prediction 169 187 - -
Lele21g1751 719 Pfam DEAD/DEAH box helicase 265 436 IPR011545 GO:0003676|GO:0005524
Lele21g1751 719 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 272 447 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1751 Lele-ChrLele21 25271318 25275185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1751 238 658 Eukaryotic Initiation Factors Gene Family AT3G19760 30.404 1.28e-56 196