Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1748 ATGGACTCCAAACACACTCCTACACTCAAGTTCCTCTGTAGCTACGGCGGCAAGATTTGTCCCCGTTCCACAGACGGCGAACTCCGTTACGTCGGCGGCCACACCAGAGTCCTCTCTGTTGATTCTTCCATTACCTTCTCAGACCTCATGGTAAAGATTGTAGAGTTCTGTGGTTCGGCTGTGACTTTGAAGTGTCCATTGCCCAACGGAGACCTCGAGACGTTGATTTCCATTACTAACGATGAGGATTTGGCCATTATTATCGAGGAATATAATCGAGCTTCGTCGTCTAAGGCTCACCCGTTGAAGATCAGAGCCATTCTTTCGCCGCCCGGGTCTCTCAAGAAAGAGTCTTCTCCTCCGTCTTCGCGGTCGTCCAGCGCCGACCTCTCTTCGGCTGGATCATATACTCTCTGCTCCGCCGAATCGTTGCCGTGTTCCCCTGCATATCGCGTTCTCCGTCCCGTCGCGTATCCGGTAGGAGTCCGTTACGGTTCGGGAAAACCGTGCTGCTATCCCGGTCAATTCTACAGAAGCTCTCGATCCTTGAACCGTGGACCTAGCTGCCCCAATTTCTGCAATCTCTGCCACTGA 594 0.5286 MDSKHTPTLKFLCSYGGKICPRSTDGELRYVGGHTRVLSVDSSITFSDLMVKIVEFCGSAVTLKCPLPNGDLETLISITNDEDLAIIIEEYNRASSSKAHPLKIRAILSPPGSLKKESSPPSSRSSSADLSSAGSYTLCSAESLPCSPAYRVLRPVAYPVGVRYGSGKPCCYPGQFYRSSRSLNRGPSCPNFCNLCH 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1748 197 CDD PB1_UP2 12 108 - -
Lele21g1748 197 MobiDBLite consensus disorder prediction 115 129 - -
Lele21g1748 197 SMART PB1_new 23 111 IPR000270 GO:0005515
Lele21g1748 197 SUPERFAMILY CAD & PB1 domains 25 116 - -
Lele21g1748 197 PANTHER OS05G0427100 PROTEIN-RELATED 7 130 - -
Lele21g1748 197 MobiDBLite consensus disorder prediction 110 129 - -
Lele21g1748 197 Pfam PB1 domain 26 102 IPR000270 GO:0005515
Lele21g1748 197 Gene3D - 29 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1748 Lele-ChrLele21 25261383 25262093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1748 1 93 MAP Kinase Kinase Kinase AT3G46920 43.011 9.82e-24 96.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1748 21 25261383 25262093 Lele21g1748 21 25261383 25262093 ECH
Lele21g1748 21 25261383 25262093 Lele23g0261 23 1796478 1797183 hybridization
Lele21g1748 21 25261383 25262093 Lele24g1689 24 22249850 22250557 hybridization