Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1745 ATGGACGCTGCTGCCTCTGATTCTGGGACTGGCGTGGCTGATCGTGGCCTTCCGAGCCACCATGGTCGCATGGATCACCGTATTGGTGCTGCTCACCTTCGCCGGCAATCGCCGTCGGAAGAACACACTCCAGAGCATGTCTTGTACATTTCTCTGTTTCATGTCAGCAATTCCATTTGCTCTGCGAATCAGACCTCCATTGGTGTCTCTTTAGGGTTCTCGTCTGACGGTGCCTGCTGGATTTTACTGGTTGATGCATGTCTTGAATATTTTTCTTCCATTATATCAAAAATGGAATCTGGAGGTGCTTTCTATTCTGTCGATGAGCTCAGATTGGACCCGAAGTGGCTAATTGATCCTAAGGTTCTATATGTCGGACCCAGAATTGGAGAAGGAGCTCATGGAAAAGTCTACGAGGGCAAATGCAAAAACCAGACGGTTGCAATTAAAATTTTGCATAAAGGAGAAACTGCAGAAGAAATGGCCAAAAGAGAAGCCCGATTTGCTAGGGAGGTTGCAATGTTGTCTAGAGTTCAACACAAGAACTTGGTGAAGTTTATTGGTACCTGCAAGGAGCCTGTAATGGTGATAGTTACCGAACTCTTACTGGGAGGAACACTGCGTAAGTATTTGCTTAACATGCGGCCAAAATGCTTGGATACACATGTTGCTATTGGTTTTGCCCTTGATATTGCTCGTGCTATGGAGTGCCTGCATTCTCATGGGATCATTCACCGTGATCTGAAACCTGAAAACTTACTCTTGACTGAAGACCAGAAAACAGTCAAGCTAGCAGATTTTGGCTTAGCTAGAGAGGAGTCATTGACAGAGATGATGACTGCTGAAACAGGAACTTACCGTTGGATGGCTCCAGAGTTGTATAGCACTGTCACACTGAAGCAGGGAGAGAAGAAGCATTACAACCATAAAGTGGATGCTTATAGCTTTGCAATTGTACTGTGGGAGCTCTTACATAACAAACTACCCTTTGAAGGCATGTCAAATCTCCAGGCAGCTTATGCAGCAGCCTTTAAAAATGTTAGACCCAGTGCAGAGAATCTCCCTGAAGAATTGACCGTGATTCTAACTTCATGCTGGCAAGAAGACCCAAATGCCCGGCCCAACTTCACCCAAATAATCCAAATGCTGCTCAATTATCTTTACACTGTTTCACCTCCTAAACCGATTATTCCTTCAAGAATATTCACTTCTGAGAATGCCATCTTCGCACCAGAGTCCCCTGGCACGAGTTCTTTGATGGCTAATAAATCTGACAACACAGGGGATACTCCCAGAGGAAAGGAGGAACTTAAGCCTAATGGCTTTCTTTGTTGCTTCAACCAATGCTTCTAA 1353 0.4501 MDAAASDSGTGVADRGLPSHHGRMDHRIGAAHLRRQSPSEEHTPEHVLYISLFHVSNSICSANQTSIGVSLGFSSDGACWILLVDACLEYFSSIISKMESGGAFYSVDELRLDPKWLIDPKVLYVGPRIGEGAHGKVYEGKCKNQTVAIKILHKGETAEEMAKREARFAREVAMLSRVQHKNLVKFIGTCKEPVMVIVTELLLGGTLRKYLLNMRPKCLDTHVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLKQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAENLPEELTVILTSCWQEDPNARPNFTQIIQMLLNYLYTVSPPKPIIPSRIFTSENAIFAPESPGTSSLMANKSDNTGDTPRGKEELKPNGFLCCFNQCF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1745 450 Gene3D Transferase(Phosphotransferase) domain 1 204 392 - -
Lele21g1745 450 CDD STKc_MAP3K-like 129 383 - -
Lele21g1745 450 ProSiteProfiles Protein kinase domain profile. 123 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1745 450 Gene3D Phosphorylase Kinase; domain 1 112 202 - -
Lele21g1745 450 FunFam serine/threonine-protein kinase HT1 204 403 - -
Lele21g1745 450 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 72 383 - -
Lele21g1745 450 PRINTS Tyrosine kinase catalytic domain signature 354 376 IPR001245 GO:0004672|GO:0006468
Lele21g1745 450 PRINTS Tyrosine kinase catalytic domain signature 237 255 IPR001245 GO:0004672|GO:0006468
Lele21g1745 450 PRINTS Tyrosine kinase catalytic domain signature 199 212 IPR001245 GO:0004672|GO:0006468
Lele21g1745 450 PRINTS Tyrosine kinase catalytic domain signature 311 333 IPR001245 GO:0004672|GO:0006468
Lele21g1745 450 SUPERFAMILY Protein kinase-like (PK-like) 117 409 IPR011009 -
Lele21g1745 450 SMART serkin_6 123 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1745 450 MobiDBLite consensus disorder prediction 413 434 - -
Lele21g1745 450 ProSitePatterns Protein kinases ATP-binding region signature. 129 150 IPR017441 GO:0005524
Lele21g1745 450 FunFam Kinase suppressor of Ras 1 112 202 - -
Lele21g1745 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Lele21g1745 450 MobiDBLite consensus disorder prediction 1 22 - -
Lele21g1745 450 Pfam Protein tyrosine and serine/threonine kinase 126 383 IPR001245 GO:0004672|GO:0006468
Lele21g1745 450 MobiDBLite consensus disorder prediction 413 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1745 Lele-ChrLele21 25243198 25248968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1745 106 450 MAP Kinase Kinase Kinase AT5G50180 79.420 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele21g1745 PK_Tyr_Ser-Thr 2.7e-59 CL0016