Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1740 ATGGCTCCCGAGCTTTACGAAGAGGAATACAATGAACTTGTTGACATCTATGCTTTTGGTATGTGCTTGCTTGAGTTGGTGACTGTCGAGTATCCATATGTTGAATGTGTTAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATCAAGCCAGCATCACTGGCAAAAGTGAAAGACCCTGGAGTTAAAGCATTTATAGAAAAGTGTATTGCAAATGTTTCTGAGCGGTTACCTGCAAGGGAACTCTTAATGGATCCCTTTCTTTTGCCAGACGATGAAAGTCACAGTGTAGGTGGTTCTTTAAGGTCCAGAGCCCCTGATTTTGGACATAGTGACCATCATGTTATTCATAATCATCCTGAAGAAACTTCTGCCGAGACTGGTTGGGCATTCAGAGTAGAAGGTCAAAGGAGAGATGTCAATACTATATTTCTGAAACTGAGAATAGTAGACTCCTCAGGTGACATTCGCAACATCCACTTCCCTTTTGATGTTGAAGCAGATACTGCAATTGCTGTTGCTAGTGAAATGGTTGAGGAGTTAGAACTTACGGATCAAGATGCTACAACTATTGCTGAGATGATTGACTTGGAAATTGGCTATCTCATTCCAGATTGGAATCCTGGTGAAACTCCTACTGCTGCTAGCCTTGATCAAGAATTAGCACTAGCAGCTTTAGGTGGCCGTACCTCTGAAACTAGGGATGAGGTTTCTCCACATGGAAATAGTTCTACAGCTTCTACTGGCAGTCTTTCACTGGAACGATTACCTTCAGGTCGGAACTACTGGTCTGACTCACCCAAGATAGGTAGAAACTCTCCATTAAGGCTGGGTGCTTCAAAATTGTCTGGTCAAGTGGATTTGAATATTGTAGGAACCTCAACCACATACAATGCTACTTCAATTGAGCAGCAGGATGGCAACTACAGTTGTGATGATGATAATAGTGTAGAGAAGAAATCTAGTGGGACTGCTGGTTCCCATTCCAGTGAGAGAAGTATTACATCTGGGGATTTACAGGCAACCAATGGAGAGTCTCCTCTGGTAGAAAAACCTATAGAATCGAAAGATTGTGAATTAGAAGATGTCAATATAATTGCTGCAAAACTCAAGCAATTATTGGTAAAACATAGAGAGGAGAAAGATGAACTAAAAAAGAAGCATGAATTAACTGTCTCAAATTTTTTGAAGGAACTTCCTCAGAAAATTCAACATGAGGTTTTAAATATGTGCAACTTGGATGCATCTGACAATGGAAATGTACAGTAA 1272 0.4057 MAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECVNAAQIYKKVTSGIKPASLAKVKDPGVKAFIEKCIANVSERLPARELLMDPFLLPDDESHSVGGSLRSRAPDFGHSDHHVIHNHPEETSAETGWAFRVEGQRRDVNTIFLKLRIVDSSGDIRNIHFPFDVEADTAIAVASEMVEELELTDQDATTIAEMIDLEIGYLIPDWNPGETPTAASLDQELALAALGGRTSETRDEVSPHGNSSTASTGSLSLERLPSGRNYWSDSPKIGRNSPLRLGASKLSGQVDLNIVGTSTTYNATSIEQQDGNYSCDDDNSVEKKSSGTAGSHSSERSITSGDLQATNGESPLVEKPIESKDCELEDVNIIAAKLKQLLVKHREEKDELKKKHELTVSNFLKELPQKIQHEVLNMCNLDASDNGNVQ 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1740 423 Coils Coil 361 388 - -
Lele21g1740 423 MobiDBLite consensus disorder prediction 238 260 - -
Lele21g1740 423 MobiDBLite consensus disorder prediction 305 350 - -
Lele21g1740 423 MobiDBLite consensus disorder prediction 321 344 - -
Lele21g1740 423 Gene3D Transferase(Phosphotransferase) domain 1 1 95 - -
Lele21g1740 423 Gene3D - 142 209 - -
Lele21g1740 423 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 406 - -
Lele21g1740 423 Pfam Protein tyrosine and serine/threonine kinase 1 76 IPR001245 GO:0004672|GO:0006468
Lele21g1740 423 MobiDBLite consensus disorder prediction 230 271 - -
Lele21g1740 423 SUPERFAMILY Protein kinase-like (PK-like) 1 127 IPR011009 -
Lele21g1740 423 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 146 197 IPR024678 GO:0004674|GO:0005524
Lele21g1740 423 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1740 Lele-ChrLele21 25219906 25221985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1740 362 419 MAP Kinase Kinase Kinase AT3G48260 41.379 7.04e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele21g1740 PK_Tyr_Ser-Thr 1.7e-05 CL0016