Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1739 ATGCCCGTCGGGTTTGGCCCTCTTGTTTCAGACTGGGTTTTTCAGAATTTGATTCCCGCAATGCCGCAGGATTCGTCTGAACAAGATGATCCTGATTCTGAGTTCGTGGAGATTGACCCCACTGGTCGATATGGTCGGTACAAGGAGATTTTGGGGCAGGGGGCTTTCAAGAAGGTATATAGAGCATTTGATGAGTTGGAAGGAATTGAAGTGGCCTGGAATCAGGTTAAGGTGGCAGATCTATTGCGCAACAATGAAGATTTGGAGCGCCTATATTCAGAAGTGCATTTGCTGAAGACTTTGAAGCATAAAAATATAATTAAATTTTATAATTCATGGGTTGATACAAATAATGAGAACATCAACTTCATCACTGAAATTTTCACTTCTGGAACGTTACGACAATATCGGCAGAAACATAAGCATGTTGACTTGAGAGCATTGAAGAAATGGTCTAGACAGATTTTGGAGGGCCTTTCTTATCTTCACAGTCATGATCCACCGGTTATTCATCGAGATTTAAAGTGTGACAATATTTTTGTCAATGGAAATCATGGTGAGGTTAAAATTGGCGACTTGGGATTGGCTGCCATACTTCAGCAAGCCAATTCAGCTCACAGTGTTATAGGTAGCATTTTTTGTGACATCATCCCATTTGTATCTGTTTCTGGATTGGACTAA 681 0.4082 MPVGFGPLVSDWVFQNLIPAMPQDSSEQDDPDSEFVEIDPTGRYGRYKEILGQGAFKKVYRAFDELEGIEVAWNQVKVADLLRNNEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTNNENINFITEIFTSGTLRQYRQKHKHVDLRALKKWSRQILEGLSYLHSHDPPVIHRDLKCDNIFVNGNHGEVKIGDLGLAAILQQANSAHSVIGSIFCDIIPFVSVSGLD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1739 226 Gene3D Phosphorylase Kinase; domain 1 28 126 - -
Lele21g1739 226 SUPERFAMILY Protein kinase-like (PK-like) 38 212 IPR011009 -
Lele21g1739 226 FunFam Probable serine/threonine-protein kinase WNK1 30 126 - -
Lele21g1739 226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Lele21g1739 226 Gene3D Transferase(Phosphotransferase) domain 1 128 214 - -
Lele21g1739 226 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 26 211 - -
Lele21g1739 226 ProSiteProfiles Protein kinase domain profile. 45 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1739 226 SMART serkin_6 45 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1739 226 Pfam Protein kinase domain 48 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1739 Lele-ChrLele21 25217349 25219843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1739 25 213 MAP Kinase Kinase Kinase AT3G18750 65.608 3.31e-91 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele21g1739 Pkinase 1.2e-36 CL0016