Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1731 ATGATGATGAATAGTGTCAGTGGTGGTCATCGGCAGATCTACAGCGGTGGTTTGCATATCTACTGGGAGAACAGTGATAGTGACATGAGAGGAATGGAAGATATCTCGTACCGATTTCCTCCACAAATCTTCTCTTCTTTCTACCCTTTATTTCGACTCGAGATCATGGAGATGGAGCGCGTGTTTGAATTTCCTCATACTCACCTCGATCGTCGGCCGAGAAAGAGGGCGCGTTTAGGCTGGGACATCCCTGAGGCCCCGAAGGCTCAGGTAGGATTGTTTTGTGGACAAGATGTTGGAAATTTTTCGAGCTATGCACCTTCAAGGGGGCCCTCAGAGCATACAAATAATTCTCTAAATGTTAAGGGAGTAGCTCGAAATGGTTCTCCCCCATGGCGAGATGATGACAAAGATGGGCATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATACACAGCAAAATGGGGGAAGGAACTTTTGGGCAAGTCTTGGAATGCTGGGACCGAGAACGGAAGGAGATGGTTGCAGTAAAAATTGTCCGTGGGATAAAAAAGTATAGAGAAGCTGCCATGATAGAGATTGAGGTGCTGCAACAGCTTGCTAAACATGATAAAGGTGGCAGTCGTTGTGTACAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGGCCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTTCGTGAGATTGGCAGACAACTATTGGAATGTGTAGCATTCATGCATGATTTGCGCATGATCCATACTGACTTGAAGCCAGAGAACATACTGCTAGTTTCACCAGACTACGTTAAAGTTCCTGACTACAGGAGTTCTTCCAGATCACCGAGTTCCTATTTCAAGAGAGTGCCAAAGTCAAGTGCTATCAAAGTTATTGATTTTGGTAGCACCATTTATGAGCGTGAGGATCAGACTTACATTGTATCAACACGGCATTATAGGGCACCCGAAGTTATACTTGGACTTGGATGGAGTTATCCATGTGATATATGGAGTGTGGGATGCATATTGATAGAGCTATGCACGGGCGAAGCTTTGTTTCAGACTCATGATAATTTGGAGCACCTTGCAATGATGGAACGGGTGCTAGGTCTGTTGCCACAGCACATGTTGAAGAGAGTGGACCGACATGCTGAGAAGTATATTCGAAGGGGCAGACTAGATTGGCCAGAGGGGGCCGCCACTAGGGATAGTATTAAAGCTGTAATGAAGCTGCCTCGGCTTCAGAATCTGGTAATGCAGCATGTGGACCATTCAGCAGGAGATCTGATACACGTGTTGCAGGGGTTACTTAGATATGACCCTTCTGAAAGACTAACAGCTAGGGAGGCTCTAAGGCATCCCTTCTTTACAAGAGAGAACCTTAGGAGATAG 1458 0.4479 MMMNSVSGGHRQIYSGGLHIYWENSDSDMRGMEDISYRFPPQIFSSFYPLFRLEIMEMERVFEFPHTHLDRRPRKRARLGWDIPEAPKAQVGLFCGQDVGNFSSYAPSRGPSEHTNNSLNVKGVARNGSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAVKIVRGIKKYREAAMIEIEVLQQLAKHDKGGSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLRMIHTDLKPENILLVSPDYVKVPDYRSSSRSPSSYFKRVPKSSAIKVIDFGSTIYEREDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILIELCTGEALFQTHDNLEHLAMMERVLGLLPQHMLKRVDRHAEKYIRRGRLDWPEGAATRDSIKAVMKLPRLQNLVMQHVDHSAGDLIHVLQGLLRYDPSERLTAREALRHPFFTRENLRR 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1731 485 Gene3D Phosphorylase Kinase; domain 1 140 233 - -
Lele21g1731 485 SMART serkin_6 153 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1731 485 MobiDBLite consensus disorder prediction 107 131 - -
Lele21g1731 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Lele21g1731 485 MobiDBLite consensus disorder prediction 107 124 - -
Lele21g1731 485 Gene3D Transferase(Phosphotransferase) domain 1 207 478 - -
Lele21g1731 485 Pfam Protein kinase domain 153 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1731 485 ProSiteProfiles Protein kinase domain profile. 153 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1731 485 SUPERFAMILY Protein kinase-like (PK-like) 140 481 IPR011009 -
Lele21g1731 485 FunFam Serine/threonine-protein kinase AFC2 229 478 - -
Lele21g1731 485 FunFam Serine/threonine-protein kinase AFC2 140 233 - -
Lele21g1731 485 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 56 481 - -
Lele21g1731 485 CDD PKc_CLK 140 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1731 Lele-ChrLele21 25146193 25151029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1731 158 478 Core Cell Cycle Gene Families AT1G76540 25.672 2.77e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lele21g1731 Pkinase 6.1e-50 CL0016