Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1725 ATGCTAGAAATGCCACTATCTCCTGCTTTTGCGTATGCGCGCCCTCTCAAGAATCTCTTCACTTCCACTCTCTTTCATCATCATACAACCTCACGCTCTCTCTTAGCTCAATCAGCCATTATCACCAGCTCTACTTTCCTCACGGGGAATTATCGGTCATCGAGGATGCAGCAATTCTGGTCTGGGAATAGCATTGGCAAGAACAAAGCAATGGTGGAGAATTTGCAACGCTATGGAGTAATATCATCAAAAAAGGTAGCTGAGGTTATGGAGAGTGTAGACAGAGCTTTGTTTGTTCCTGATGGTACTCCACCCTATGTTGACAGCCCAATGGCAATAGGCTTCAATGCAACTATATCTGCACCTCATATGCATGCCATGTGCCTCCAGTTGCTGGAGCAGAATTTGCAGCCTGGGATGCGTGCTCTGGACGTTGGATCTGGGACTGGGTATCTTACAGCATGCTTTGCTTTGATGGTTGGACCCCAAGGTCGTGCTGTTGGCGTGGAGCATATTCCTGAATTAGTCTCTTCTTCATTGGAGAATATTCAGAAAAGTGCTGCAGCTCCACTGTTGAAAGATGGTTCCCTCTCGGTGCATGCTGGTGATGGAAGGAAAGGTTGGCCAGAGCATGCTCCGTATGATGCCATACATGTGGGAGCAGCTGCACAAGAAATCCCCCAACCACTCATAGATCAGTTGAAGCCTGGAGGTAGAATGGTGATTCCTGTTGGAAACGTATTTCAGGATCTAAAGGTAATTGACAAAAACTTCGATGGTTCTGTAAGCGTGCGGAGTGAGACTTCTGTTCGCTATGTCCCTCTCACAAGTCGAGATGCTCAATTACGAGTTTTATTTCCGTTTGATACATTTGGATAG 879 0.4653 MLEMPLSPAFAYARPLKNLFTSTLFHHHTTSRSLLAQSAIITSSTFLTGNYRSSRMQQFWSGNSIGKNKAMVENLQRYGVISSKKVAEVMESVDRALFVPDGTPPYVDSPMAIGFNATISAPHMHAMCLQLLEQNLQPGMRALDVGSGTGYLTACFALMVGPQGRAVGVEHIPELVSSSLENIQKSAAAPLLKDGSLSVHAGDGRKGWPEHAPYDAIHVGAAAQEIPQPLIDQLKPGGRMVIPVGNVFQDLKVIDKNFDGSVSVRSETSVRYVPLTSRDAQLRVLFPFDTFG 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1725 292 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 68 255 IPR029063 -
Lele21g1725 292 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 202 217 IPR000682 GO:0004719|GO:0036211
Lele21g1725 292 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 67 279 - -
Lele21g1725 292 Gene3D Vaccinia Virus protein VP39 61 285 IPR029063 -
Lele21g1725 292 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 57 282 IPR000682 GO:0004719|GO:0036211
Lele21g1725 292 CDD AdoMet_MTases 141 244 - -
Lele21g1725 292 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 67 281 IPR000682 GO:0004719|GO:0036211
Lele21g1725 292 FunFam Protein-L-isoaspartate O-methyltransferase 59 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1725 Lele-ChrLele21 25109630 25112428 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1725 21 25109630 25112428 Lele17g1109 17 21400568 21403635 CCT
Lele21g1725 21 25109630 25112428 Lele18g0432 18 2545814 2547631 CCT
Lele21g1725 21 25109630 25112428 Lele19g0451 19 2596264 2599086 CCT
Lele21g1725 21 25109630 25112428 Lele20g1001 20 15954438 15957376 CCT
Lele21g1725 21 25109630 25112428 Lele21g1725 21 25109630 25112428 ECH
Lele21g1725 21 25109630 25112428 Lele23g0286 23 1956125 1958717 hybridization
Lele21g1725 21 25109630 25112428 Lele24g1669 24 22134929 22136841 hybridization