Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1715 ATGGCTTCAGGCGAGGGATTTCTGACAGATGAGCAGAGGGAAATGCTAAAAATTGCTAGCAATAATGTGGAAAATTTATCTTCATCCCCGAAATCTCCCACATCCTTTGTTGCTGACCATCATATAAAAGCTCCTGCTGGTAGTAAGGCCCAAACTGCTGGGATTGCTGTGAGGCATGTGCGGCGATCACACTCTGGAAAGCTTGTGCGGGTGAAGAAGGATGGTGCTGGTGGTAAGGGAACTTGGGGAAAATTGCTTGATACTGATGGTGAATCTCATATAGACAGGAAAGACCCAAATTATGATAGTGGTGAGGAACCTTATCAGCTGGTTGGGTCTACTGTCACTGACCCCTTAGATGAATTCAAGAAGGCTGTTGTTTCCACCATCGAGGAATATTTCAGCACTAGTGATGTGGAATTAGCTGCCTCTGATCTCAGAGAACTTGGTTCAAGTGAATATTATCCATACTTCATCAAGCGCCTTGTGTCTATGGCCATGGATAGACATGATAAGGAGAAAGAAATGGCTTCTGTTTTGCTTTCAGCATTGTATGCTGATGTGATTAGTCCTGCACAGATTAGGGATGGATTTTTTATGCTTCTCGAATCTGCTGATGATCTTGCAGTGGACATACTGGATGCAGTTGACGTCCTTGCTTTGTTTCTGGCTCGGGCTGTTGTTGATGATATCCTTCCTCCAGCCTTTCTTGCCAGGGCAAGAAAGGCACTTCCTGAGTCATCCAAGGGGTTTCAGGTTATCCAGACTGCAGAGAAGAGTTATCTCTCAGCTCCACATCATGCAGAGCTTGTAGAGAGGCGATGGGGTGGTACCACTCACATCACTGTTGAAGAAGTAAAGAAGAAGATTTCTGATTTATTAAGAGAATATGTTGAAAGTGGTGATACGGTTGAAGCCTGCAGGTGCATAAGGGAGTTGGGGGTTTCATTCTTTCATCATGAGGTTGTGAAGAGGGCTCTGGTACTTGCCATGGAGATCTGTTCAGCAGAATCTTTAATGTTGAAGTTATTAAAAGAAGCAGCAGAAGAAGGGCTCATTAGTTCCAGCCAAATGGTGAAAGGTTTCTCTCGCTTGGCAGAAGGCTTAGATGATCTTGCTCTCGATATTCCATCAGCCAAAACTTTGTTTCAATCATTGGTACCCAGGGCAATAGCTGAAGGATGGCTTGATGCTTCATTTTTGAAACCCTCTGGTGAAGATGGGGATATCCCAGTTGAAGATGAAAAAGTGAGGAACTACAAGAAAGAGGCAGTAACTATAATTCATGAGTATTTTCTCTCTGATGATATTCCTGAACTCATTCGGAATCTTGAAGATCTTGGAGCACCTGAGTTTAACCCAATATTTTTGAAGAAGCTAATTACTCTTGCAATGGACAGAAAAAACAGAGAAAAGGAAATGGCATCAGTACTACTATCTGCTCTTCATATAGAGATATTCTCCACAGAGGATATAGTTAATGGTTTTGTCATGCTTCTGGAAAGTGCTGAAGATACTGCACTGGATATATTGGATGCTTCCAATGAACTTGCCCTGTTTTTAGCTCGGGCTGTGATCGATGATGTATTGGCCCCTCTGAATTTAGAAGAAATTGGCAGCAGGTTACCACCTAAATGCAGTGGTAGTGAAACTGTGCGTATGGCTCGATCACTCATTGCAGCTCGTCATGCTGGTGAGAGGCTATTGAGATGTTGGGGTGGGGGTACTGGATGGGCTGTGGAGGATGCCAAGGACAAGATCATGAAGCTGTTGGAGGAGTATGAAAGTGGGGGTGTGGTGAGTGAAGCATGCCAGTGTATTCGTGATCTTGGAATGCCTTTCTTTAACCATGAGGTTGTGAAGAAAGCTTTGGTCATGGCTATGGAGAAGAAGAATGATAGGATGCTGGATCTGCTGCAGGAGTGCTTCAGTGAAGGTCTCATCACTATCAATCAGATGACTAAAGGCTTCACCCGCATCAAGGACGGTCTCGACGATCTGGCTCTCGACATTCCAAATGCACGTGAGAAATTTGCCTTCTATGTGGAGCATGCAAACAACAAGGGTTGGCTTTTACCTTCATTTGATTCTCCAGATGCCTGA 2103 0.4417 MASGEGFLTDEQREMLKIASNNVENLSSSPKSPTSFVADHHIKAPAGSKAQTAGIAVRHVRRSHSGKLVRVKKDGAGGKGTWGKLLDTDGESHIDRKDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSTIEEYFSTSDVELAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLLESADDLAVDILDAVDVLALFLARAVVDDILPPAFLARARKALPESSKGFQVIQTAEKSYLSAPHHAELVERRWGGTTHITVEEVKKKISDLLREYVESGDTVEACRCIRELGVSFFHHEVVKRALVLAMEICSAESLMLKLLKEAAEEGLISSSQMVKGFSRLAEGLDDLALDIPSAKTLFQSLVPRAIAEGWLDASFLKPSGEDGDIPVEDEKVRNYKKEAVTIIHEYFLSDDIPELIRNLEDLGAPEFNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAREKFAFYVEHANNKGWLLPSFDSPDA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1715 700 MobiDBLite consensus disorder prediction 80 106 - -
Lele21g1715 700 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
Lele21g1715 700 Gene3D - 570 697 - -
Lele21g1715 700 Gene3D - 272 403 - -
Lele21g1715 700 Pfam MA3 domain 122 233 IPR003891 -
Lele21g1715 700 Pfam MA3 domain 286 397 IPR003891 -
Lele21g1715 700 Pfam MA3 domain 421 530 IPR003891 -
Lele21g1715 700 Pfam MA3 domain 584 691 IPR003891 -
Lele21g1715 700 PANTHER PROGRAMMED CELL DEATH 4 3 696 IPR039778 GO:0045892
Lele21g1715 700 SMART ma3_7 286 397 IPR003891 -
Lele21g1715 700 SMART ma3_7 122 233 IPR003891 -
Lele21g1715 700 SMART ma3_7 420 531 IPR003891 -
Lele21g1715 700 SMART ma3_7 583 692 IPR003891 -
Lele21g1715 700 ProSiteProfiles MI domain profile. 582 700 IPR003891 -
Lele21g1715 700 MobiDBLite consensus disorder prediction 86 103 - -
Lele21g1715 700 FunFam programmed cell death protein 4 113 264 - -
Lele21g1715 700 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
Lele21g1715 700 Gene3D - 409 563 - -
Lele21g1715 700 Gene3D - 114 262 - -
Lele21g1715 700 SUPERFAMILY ARM repeat 119 278 IPR016024 -
Lele21g1715 700 FunFam programmed cell death protein 4 409 563 - -
Lele21g1715 700 SUPERFAMILY ARM repeat 417 575 IPR016024 -
Lele21g1715 700 ProSiteProfiles MI domain profile. 419 540 IPR003891 -
Lele21g1715 700 SUPERFAMILY ARM repeat 282 403 IPR016024 -
Lele21g1715 700 FunFam Programmed cell death protein 4 271 406 - -
Lele21g1715 700 SUPERFAMILY ARM repeat 579 695 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1715 Lele-ChrLele21 25041332 25044218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1715 586 682 Eukaryotic Initiation Factors Gene Family AT5G57870 32.000 4.72e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1715 21 25041332 25044218 Lele21g1715 21 25041332 25044218 ECH
Lele21g1715 21 25041332 25044218 Lele23g0295 23 2023963 2029447 hybridization
Lele21g1715 21 25041332 25044218 Lele24g1659 24 22073776 22076954 hybridization