Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1700 ATGATTCCTCTTTATAGAGCCCTCAAAGGAGATTTAAGTGATAATAATAATGATCATAGTCCTATAATAGGCCTTGGTTTTCATAATTCCTCTGCTGGGGACGTTCCCTATCCTCATTTGCTTCCTGTTTTTGAAACCAGAGCTTCTCCTCCACCTTGGACCCTTCCCTTCTCTGAAGAAACCAAAGGAAATAATAATAAGAGGTTGAAGAAATTTCCAAGCATCCCAGAAACACTTGGAGATTACAGAAGATTTTCTTCAAGCGGTGGAAGTGAAGATTGTTACTATAGCAGTCTCGGCAGAAGCAACAGTGTGAATAGCCTTCCAAAGCTCCATTTCAGAGACCATATATGGACTATTACTCAGAGATACCTTGCTTCTGAAGAGGCTGCACAGAAAGACATTATCAATTCTGAGGTTAGTGAAGCTGACGAACAAGAAGATCGGTATTGTGCCCATGGGATGAGACTTGTTCAGCTTCTTGTTCATTGTGCTGAAGGTGTGGCTTGTCGTGATAAATCACATGCTTCAACTTTGCTATCTGAACTGAGATCAAATGCACTGGTCTTTGGCTCTCCCTTTCAGCGAGTGGCTTCTTGTTTCGCCCAAGGGCTATCTGATCGGCTCGCGATGGTACAACCGATTGGAGCCATGGGGAATACAGAACCAATGATGAACATTATGGACATAGCCTCAGAAGAAATGGAAGAAGCATTTAAATTGGTTTATGAGCTTTGCCCACATATTAAGTTTGGTCACTTTGTAGCCAATGCCACAATATTGGAAGCCTTTGAAAACCACAGCGTTGTGCATGTGGTGGACCTCGGGATGACTCTTGGCCTTCCCCATGGCCACCAATGGAGGGGACTGATTCAGAGCCTGGCTAACCGCCCTGGCCAACCGATTCGTCTCCTTCGAATTACAGGGGTGGGTCTTTGTGTTGAGAAACTCAAGCTCATTGGTAAAGAACTAGAACTTTATGCTCATAACTTGGGGATTAACCTTGAATTCTCGGTGGTGGTAAAGAACTTAGAAAATTTGCATACTGATGACATTAAGGTGAATGATGAGGAGGTTCTGGTGGTTAATAGCATTCTTCAGTTGCACTGTGTAGTGAAAGAGAGTCGTGGGGCCTTAAACTCAGTGCTTCAGACGATTCATAAACTCTCACCAAAAGTGTTGGTTATGGTTGAACAGGACTCGAGCCATAATGGACCCTTCTTCCTTGGGAGGTTCATGGAAGCACTTCATTATTACTCTGCTATTTTTGACTCTTTGGATGCCATGTTACCTAAGTATGACACTAAGAGAGCAAAAATAGAACAGTTCTATTTTGCAGAAGAGATAAAGAACATTGTCAGCTGTGAAGGACCAGCGAGGGTGGAGAGGCACGAGAGGGTGGACCAGTGGCGACGGAGGATGAGTAGGGCCGGGTTTCAGGGCACACCGATGAAGATGGTGACTCAAGCCAAGCAGTGGCTTCAGAAGAACCAGGTTTGTGATGGCTATACTGTTGTGGAGGAGAAAGGTTGCTTGGTCCTTGGGTGGAAATCAAAGCCAATTGTGGCAACTTCTTGCTGGAAGTGCTGA 1590 0.4465 MIPLYRALKGDLSDNNNDHSPIIGLGFHNSSAGDVPYPHLLPVFETRASPPPWTLPFSEETKGNNNKRLKKFPSIPETLGDYRRFSSSGGSEDCYYSSLGRSNSVNSLPKLHFRDHIWTITQRYLASEEAAQKDIINSEVSEADEQEDRYCAHGMRLVQLLVHCAEGVACRDKSHASTLLSELRSNALVFGSPFQRVASCFAQGLSDRLAMVQPIGAMGNTEPMMNIMDIASEEMEEAFKLVYELCPHIKFGHFVANATILEAFENHSVVHVVDLGMTLGLPHGHQWRGLIQSLANRPGQPIRLLRITGVGLCVEKLKLIGKELELYAHNLGINLEFSVVVKNLENLHTDDIKVNDEEVLVVNSILQLHCVVKESRGALNSVLQTIHKLSPKVLVMVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQGTPMKMVTQAKQWLQKNQVCDGYTVVEEKGCLVLGWKSKPIVATSCWKC 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1700 529 Pfam GRAS domain family 157 528 IPR005202 -
Lele21g1700 529 ProSiteProfiles GRAS family profile. 148 528 IPR005202 -
Lele21g1700 529 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 131 523 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1700 Lele-ChrLele21 24908925 24910514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1700 154 529 GRAS Transcription Factor Family AT1G66350 37.173 1.13e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele21g1700 GRAS 1.5e-112 CL0063