Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1693 ATGGCAGCAGGGTGGGACAATGTTGTGAGGAGAAGAGAACCTTACAAATATAGTTCCAATAAGGAATTTGATCATTATAGTACTGGTTCTTCTGGCGTGGCAGTGGCAGTGCATCGCTCTAGCAGTCGCGGCCACCACGTAACGTATAAGAACGGTTGTAGATCTTCAAATTTTGAGGATTCAGGTCCTGGACGGATTGAGTCTTATGGTGAAAGGGAAGAGAGAGAGCAGCTCGAGTTTTACGGAAATAATGGCAAATATGCACCTGCATCTGTGTTTCAGGCAGATCACGGTGAAGCACCCCAAGAGAAGAGAAGAAAAATTTCTCCAATTGTATGGGTAGCAGAAAAGGAAGTAAAAATATCTTCTAAGAACAGCTCAGCACAGGTGACTGCTTTCTCTCCCTTTTGTCCATCTCAGCAAAGCTCTCATGGAGCCAGTGGTGTTTCTTATGGTGGAGTTGTTAATCCTGAGTCTCCAGCAGATTTCTCTAGTGTATTACCTCAAGGACATTCTGGAAATGATGGTAAATTTGTTGAACAGTCTGGTAAGAAACATGTGCAAGGTTGGAATATCACAATGTCAAGATGGTTGTCGGATGATTATTCCCCAAGGAATGCATCTGATGATGATTTCATGCATGGAGAAGAGACATCAAGCCCAGAAAGTGGTGAATTCATATGTGAAAGTTCAGAAGGCAAAAAATCTAGATCATCAATTAATAGTGCAGGAGTGGACTGTTGCTGCCCTTCAAGTAAAGAAGTTAATGATTCCAAAAAGGAGTTACTTGTGGACACTATGGATGACGATGAGGCACATAGTGAAACTTCTAATGTTAGTCACCCTTCATCAGATCCTGAAGATAGTGGGGGTTTATTAGCGGTGCAGAGAAGCATAAACAGCATCCAGAGTTGCAGAAGTGTTTTAGAATTTGAGATGATCAAGAAAATAAATGAAGGAACTTATGGTATTGTCTATAAAGCTAGGGATAAGAAGACCGGGGAAATTGTAGCATTGAAGAAGGTGAAGATGAATATGGATAGAGATGGCTTTCCACTGTCCTCTTTGAGAGAAATAAATATTCTCTCATCTTTTAATCATCCTTCTATTGTCGAAGTTAAAGAAGTGGTGGTAGATGATTTCGATGATGTTTTTATGGTAATGGAGTATATGGAGTATGATCTCAAAGGGCTGATACAGATGATGAAGCGGCCCTTTAGTATAGGTGAAATAAAATCCTGGCTGATGAAACTTCTCAAGGGTGTCAAGTATCTCCATGACAATTGGGTTCTTCACAGAGATTTGAAGACATCAAATATCCTGTTAAATAAAGAAGGTGAGCTGAAAATATGCGACTTTGGTTTATCTCGTCATTATGGAAGTCCACTCAAGCCTTATACTCCTCTTGTGGTTACTCTATGGTACAGGGCTCCTGAACTTCTGCTAGGTGCTAAAGAATACTCAATGGCTATTGATATGTGGTCAATTGGTTGCATAATGGCTGAATTAGTTGCAAAGTCACCTCTATTCCGAGGAAAATCCGAAATTGAGCAGATTAATAACATTTTCCAAACTCTGGGCACGCCTAATGAGAAAATTTGGCCAGGAGTATCCAAATTATCTGGATTCAAGGCCAACTTTGTTAAGCAGCCGTACAATCTGTTGCGGAAGAAGTTTCCAGTTGCATCCTTCATTGGATCACCTGTTCTTTCTGAATTGGGATTTGACTTGTTGAGCAAGCTTCTAACTTATGACCCTGAAAAGAAGCTGCTCTTCTTCATGACTGGTTCAATGAAGCTCCTCTTGCTAATTCTGACCTCAAGATCACATTGCCTCCACAGCGCTGCTAGGACTGTAGGACAGGTACATCTGCTGGCTGCATCTGAGACATCTTCAGGAACAGTGCTATCCCCCCCCCCCCTCATATTTGTCTGTCTCACCAAGTTTATGACTACATCTGTAAAGATTAATGTGATTGCAAAGGACAGGGCAATGGTTTCTACTAGACTTTTGGTTGACATAAGTAGAAGCAACTGA 2037 0.4124 MAAGWDNVVRRREPYKYSSNKEFDHYSTGSSGVAVAVHRSSSRGHHVTYKNGCRSSNFEDSGPGRIESYGEREEREQLEFYGNNGKYAPASVFQADHGEAPQEKRRKISPIVWVAEKEVKISSKNSSAQVTAFSPFCPSQQSSHGASGVSYGGVVNPESPADFSSVLPQGHSGNDGKFVEQSGKKHVQGWNITMSRWLSDDYSPRNASDDDFMHGEETSSPESGEFICESSEGKKSRSSINSAGVDCCCPSSKEVNDSKKELLVDTMDDDEAHSETSNVSHPSSDPEDSGGLLAVQRSINSIQSCRSVLEFEMIKKINEGTYGIVYKARDKKTGEIVALKKVKMNMDRDGFPLSSLREINILSSFNHPSIVEVKEVVVDDFDDVFMVMEYMEYDLKGLIQMMKRPFSIGEIKSWLMKLLKGVKYLHDNWVLHRDLKTSNILLNKEGELKICDFGLSRHYGSPLKPYTPLVVTLWYRAPELLLGAKEYSMAIDMWSIGCIMAELVAKSPLFRGKSEIEQINNIFQTLGTPNEKIWPGVSKLSGFKANFVKQPYNLLRKKFPVASFIGSPVLSELGFDLLSKLLTYDPEKKLLFFMTGSMKLLLLILTSRSHCLHSAARTVGQVHLLAASETSSGTVLSPPPLIFVCLTKFMTTSVKINVIAKDRAMVSTRLLVDISRSN 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1693 678 Gene3D Transferase(Phosphotransferase) domain 1 393 598 - -
Lele21g1693 678 MobiDBLite consensus disorder prediction 269 291 - -
Lele21g1693 678 FunFam Cyclin-dependent kinase G-2 393 594 - -
Lele21g1693 678 MobiDBLite consensus disorder prediction 201 242 - -
Lele21g1693 678 Pfam Protein kinase domain 311 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1693 678 SMART serkin_6 311 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1693 678 SUPERFAMILY Protein kinase-like (PK-like) 310 590 IPR011009 -
Lele21g1693 678 MobiDBLite consensus disorder prediction 203 218 - -
Lele21g1693 678 Gene3D Phosphorylase Kinase; domain 1 294 392 - -
Lele21g1693 678 MobiDBLite consensus disorder prediction 160 181 - -
Lele21g1693 678 PANTHER CELL DIVISION PROTEIN KINASE 310 590 - -
Lele21g1693 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Lele21g1693 678 FunFam cyclin-dependent kinase G-2 isoform X1 296 392 - -
Lele21g1693 678 ProSiteProfiles Protein kinase domain profile. 311 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1693 Lele-ChrLele21 24868852 24871367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1693 302 590 Core Cell Cycle Gene Families AT5G10270 44.984 1.88e-80 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Lele21g1693 Pkinase 1.5e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1693 21 24868852 24871367 Lele23g0316 23 2212016 2214358 hybridization
Lele21g1693 21 24868852 24871367 Lele24g1639 24 21934093 21936411 hybridization