Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1689 ATGGCTAGCTGTAGTTCTCTTTCATCGTGTCCATACAGCCTTTATTGTCGTCCGAACCCAAAAAGGCGTCCCATTTTGTGCTCTGTTAGCTCTTCTTCGCTCATAGGTATTGATGGATCTAAAGTACCCCGCAAAAGATCAAGAAAAATTGAAGGTCCTGGAAAAAGCATGGAAGATTGTGTTCAACGCAAGATGGAGCAATTTTATGAAGGATCTAATGGGCCACCCCTGCGAGTTCTTCCCATTGGTGGGTTGGGTGAAATTGGGATGAATTGCATGCTTGTTGGGAACAATGATCGTTATATCCTTATTGATGCTGGTGTCATGTTCCCAGACTATGATGAGCTTGGTGTCCAAAAGATTATACCTGATACAACATTTATAAGAAAATGGAGGCACAAAATTGAAGCAGTTGTTATAACGCATGGTCATGAAGATCATATCGGTGCGTTGCCTTGGGTCTTACCAGCATTGGATACCCATACGCCAATTTTTGCATCTTCCTTTACAATGGAGCTTATTAGGAAACGTTTGAAGGAGCATGGTATTTTTGTTCCTTCAAGACTCAAACTATTTCGAGCAAGGAAGAAGTTTATGGCTGGGCCATTTGAAATAGAGCCTATCAGGGTGACCCATTCTATCCCTGATTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCATACTGGGGACTGGAAGATTGATGAATCACCACTAGATGGTAAAGTTTTTGACCGTGAAGTTTTGGAGGAACTCTCTAAAGAAGGAGTAACATTAATGATGAGCGATTCAACAAACATACTTTCACCTGGAAGAACAATTAGTGAATCCTCTGTGGCAGATGCACTGTTAAGGCATATTTCTGCTGCTAAAGGAAGGGTTATTACAACCCAGTTTGCATCAAATATACATCGTCTTGGAAGTGTGAAAGCTGCAGCTGATTTAACTGGTAGAAAAATGGTGTTTGTTGGCATGTCTTTACGGACATATCTAGATGCAGCTTGGAAGGATGGAAAGGCACCATTTGATCCATCCACCCTGGTGAAAGTGGAGGATATTGATGCTTATGCTCCTAAGGATTTGCTGATTGTAACAACTGGATCTCAGGCAGAACCTCGTGCTGCCTTGAATCTTGCATCATATGGTGGTAGCCATTCTTTCAAACTGACCAAGGAAGATATAATTTTGTATTCTGCTAAGGTTATCCCTGGTAATGAGTCTCGTGTGATGAAAATGATGAACCGCATATCAGAGATTGGATCATCAATAATAATGGGGAAGAATGAGGGGCTGCACACATCTGGTCATGCGTACCGTGGAGAATTGGAGGAAGTACTTAGAATAGTGAAACCGCAACATTTTCTTCCCATACATGGAGAACTCTTGTTCCTGAAGGAGCATGAATTACTTGGAAAGTCAACTGGCATTCGACACACTGCTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCACACTTAAGAAACAGAAGAGTCCTTTCCAATGGCTTTGTTTCCCTTGGAAAAGAGAATTTACAGTTGAAGTACAGTGACGGGGACAAAGCATTTGGTACATCCAGTGAACTTTTCGTTGATGAAAGATTGAGAATTGCTTTAGATGGAATTATTGTTGTCAGCATGGAAATATTTCGCCCTGAAAATAGTGAGAGTCATGTTGAAAACACCTTAAAAGGGAAGGTAAGAATTACAACAAGGTGCCTGTGGCTTGACAAAGGAAAGCTGTTGGATGCGCTTCATAAAGCTGCTCATGCTGCACTTTCAAGCTGCCCGGTTAACTGTCCATTGGCTCACATGGAAAGAACTGTATCTGAGGTATTGAGGAAGTTGGTGAGGAAGTATAGTGGCAAAAGACCAGAAGTTATTGCTATTGCTATAGAAAACCCTACAGCTGTTCTTGCTGATGAGATAAAAGTAAGGCTGTCAGGAAAATCTCATATGGGTCTTGGGATACCATCAATGAGAAAAGCTATGGATGGACGTAAAGAGGAAAAGATATCCAGTAAAATGCCAATAAAAGGAGATGATGGCACTGATGTTGAAGGACTCCTACCTGAAGAAGATATCCCTACTCCAAGGGGAGTCGAGAGCGAGTTGCCTGATTCAGAGGATTCAGATGAATTTTGGAAATCATTCATCACACCTTTGACCGCCAAAAAGTCAATCAAAGCGAACAATGGTTATATTCCACGAAAGCAGCAAGAGTCCCAGCCGATAAAAGATGATTCTACAGACTCTGAAGAAGGTGAGTCTGAATCCAAGCCTTCGAAAACAGTGAAGAGAAATAAATGGAAACCTGAGGAAGTGAAGAAGCTGATCGATATGCGCGGGGAGATGAAGGAGAGATTTCAAGTTGTGAAGGGAAGAATGATCCTCTGGGAGGAGATATCTCAAAAGTTGTTGGCTGATGGTATCAAAAGAAGTCCAGGGCAATGTAAATCTCTGTGGACATCTTTGATACAAAAATACGAGGAGATCAAGAATGGGAAGAGGAGCAAGAAAAGCTGGCCATATCTGGAGGACATGGAAAGGATATTGTCGGATAACGAGGCACTGGCAGCAAAATGA 2592 0.4182 MASCSSLSSCPYSLYCRPNPKRRPILCSVSSSSLIGIDGSKVPRKRSRKIEGPGKSMEDCVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNNDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWRHKIEAVVITHGHEDHIGALPWVLPALDTHTPIFASSFTMELIRKRLKEHGIFVPSRLKLFRARKKFMAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDESPLDGKVFDREVLEELSKEGVTLMMSDSTNILSPGRTISESSVADALLRHISAAKGRVITTQFASNIHRLGSVKAAADLTGRKMVFVGMSLRTYLDAAWKDGKAPFDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGGSHSFKLTKEDIILYSAKVIPGNESRVMKMMNRISEIGSSIIMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFVSLGKENLQLKYSDGDKAFGTSSELFVDERLRIALDGIIVVSMEIFRPENSESHVENTLKGKVRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSEVLRKLVRKYSGKRPEVIAIAIENPTAVLADEIKVRLSGKSHMGLGIPSMRKAMDGRKEEKISSKMPIKGDDGTDVEGLLPEEDIPTPRGVESELPDSEDSDEFWKSFITPLTAKKSIKANNGYIPRKQQESQPIKDDSTDSEEGESESKPSKTVKRNKWKPEEVKKLIDMRGEMKERFQVVKGRMILWEEISQKLLADGIKRSPGQCKSLWTSLIQKYEEIKNGKRSKKSWPYLEDMERILSDNEALAAK 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1689 863 MobiDBLite consensus disorder prediction 664 688 - -
Lele21g1689 863 Gene3D - 772 833 - -
Lele21g1689 863 Gene3D - 81 493 IPR036866 -
Lele21g1689 863 MobiDBLite consensus disorder prediction 732 773 - -
Lele21g1689 863 MobiDBLite consensus disorder prediction 743 773 - -
Lele21g1689 863 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 434 471 IPR011108 -
Lele21g1689 863 MobiDBLite consensus disorder prediction 699 714 - -
Lele21g1689 863 MobiDBLite consensus disorder prediction 658 714 - -
Lele21g1689 863 Gene3D - 278 428 IPR042173 -
Lele21g1689 863 SMART Lactamase_B_5a 89 286 IPR001279 -
Lele21g1689 863 CDD GT1 770 835 - -
Lele21g1689 863 Pfam Myb/SANT-like DNA-binding domain 769 853 IPR044822 -
Lele21g1689 863 SMART sant 768 830 IPR001005 -
Lele21g1689 863 ProSiteProfiles Myb-like domain profile. 764 828 IPR001005 -
Lele21g1689 863 Pfam Beta-lactamase superfamily domain 100 236 IPR001279 -
Lele21g1689 863 CDD RNaseJ_MBL-fold 80 491 - -
Lele21g1689 863 PANTHER RIBONUCLEASE J 1 863 - -
Lele21g1689 863 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 491 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1689 Lele-ChrLele21 24834944 24842532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1689 771 855 Trihelix Transcription Factor Family AT2G38250 34.483 6.13e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele21g1689 Lactamase_B_2 1.3e-10 CL0381