Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1686 ATGGACCTCCTGATAGAGTCTACCTCCGCAGCTCATTTCTCTGGTTGGCGTCCTTCCACGAAGGCGTCGTCTTCTTCATTGTTATCTCCGACTGATGACGGTCTCATTGGCCCGACGCAGCCATTTGTGATCGGTGTCTCTGGAGGTACGGCATCAGGCAAAACCTCTGTGTGTGATATGATCATTCAACAACTGCAAGATCATAGAGTGGTGCTAGTCTGTCAGGACTCATTCTACCGTGGTTTAACAGAAGAAGAATTGAAACGCGTCCATGAATATAATTTTGATCATCCTGACGCCTTTGATATTGAGGAACTTGTAGAGTGTATCACCAAGCTCCAATCTGGACAATCTGTTAATGTGCCAGTATATGATTTTAAGACACATCAGCGGTCGTCTGAAAAATATACCCAGGTCAATGCATCTGAGGTAATCATTTTGGAGGGCATATTGGTTTTCCATGAGCAACGTGTCCGCGACATGATGAATATGAAAATCTTTGTTGATACAGATGCTGATGTAAGGCTTGCCCGCAGAATAAGACGTGATACTGTGGACCGGGGTAGAGACATACAGTCGTATTCAAAATTTGTCAAGCCTGCCTTTGATGATTTCATTCTTCCAACCAAAAAATATGCCGATATCATAATACCTCGTGGGAAAGAGAATGTGGTTGCAGTTGACTTGATTGTTCAACATATCCGCACTAAGCTTGGCCAACATAACCTATGCAAAATATATCCAAATTTGAATGTTATCCACTCTACGTACCAGATTAGAGGCATGCACACTCTAATTCGTGACAAGAATATATCAAAGCACGATTTTGTTTTTTATTCAGATCGGCTCATTCGTTTGGTAGTAGAACACGGTCTAGGCCATTTGCCATTTACAGAAAAGCAGGTTATCACACCTACAGGATCAATTTACACTGGAGTTGATTTTTGTAAGAAATTGTGCGGCGTATCCGTCATTCGAAGTGGTGAAAGCATGGAGAATGCTTTGCGCGCATGTTGTAAAGGAATTAAAATAGGAAAAATTCTCATCCACCGTCAAGGAGGGGATGAGACCCAGGTACAAGCTAGTTCCCATAACTGGTTCACTTACAATTCATCCCCTCTTCTTCTTCTTCTATATAAGCTTATTTATGAGAAGCTTCCGAAAGATATTTCAAAGAGACATGTTCTCCTTTTGGACCCAGTACTTGGTACAGGTAACTCTGCGAGCCAAGCCATTGAGCGTCTCATACGAAAGGGAGTTCCCGAATCCCACATAATATTCCTCAACCTCATCTCTGCTCCTGAGGGAATACACCGTGTATGCAGCCGTTTCCCATCCTTGCAAATAGTCACTTCGGATATTGAAGCTGGACTAAATGAAGAGTTTCGAGTTGTACCAGGGTTGGGAGAATTCGGAGACCGCTATTTCGGTACTGACGAGCATTTATTTATTGGGACTAGCGATGAGTAA 1470 0.4286 MDLLIESTSAAHFSGWRPSTKASSSSLLSPTDDGLIGPTQPFVIGVSGGTASGKTSVCDMIIQQLQDHRVVLVCQDSFYRGLTEEELKRVHEYNFDHPDAFDIEELVECITKLQSGQSVNVPVYDFKTHQRSSEKYTQVNASEVIILEGILVFHEQRVRDMMNMKIFVDTDADVRLARRIRRDTVDRGRDIQSYSKFVKPAFDDFILPTKKYADIIIPRGKENVVAVDLIVQHIRTKLGQHNLCKIYPNLNVIHSTYQIRGMHTLIRDKNISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSIYTGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKILIHRQGGDETQVQASSHNWFTYNSSPLLLLLYKLIYEKLPKDISKRHVLLLDPVLGTGNSASQAIERLIRKGVPESHIIFLNLISAPEGIHRVCSRFPSLQIVTSDIEAGLNEEFRVVPGLGEFGDRYFGTDEHLFIGTSDE 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1686 489 Pfam Uracil phosphoribosyltransferase 255 478 - -
Lele21g1686 489 PRINTS Uridine kinase signature 41 58 - -
Lele21g1686 489 PRINTS Uridine kinase signature 173 183 - -
Lele21g1686 489 PRINTS Uridine kinase signature 116 131 - -
Lele21g1686 489 PRINTS Uridine kinase signature 187 198 - -
Lele21g1686 489 PRINTS Uridine kinase signature 71 82 - -
Lele21g1686 489 PANTHER URIDINE KINASE 39 356 - -
Lele21g1686 489 SUPERFAMILY PRTase-like 240 479 IPR029057 -
Lele21g1686 489 Gene3D - 38 240 IPR027417 -
Lele21g1686 489 TIGRFAM udk: uridine kinase 42 237 IPR000764 -
Lele21g1686 489 CDD PRTases_typeI 314 454 IPR000836 -
Lele21g1686 489 FunFam Probable uracil phosphoribosyltransferase 240 478 - -
Lele21g1686 489 CDD UMPK 43 237 IPR000764 -
Lele21g1686 489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 230 IPR027417 -
Lele21g1686 489 Gene3D - 241 478 IPR029057 -
Lele21g1686 489 FunFam Uridine kinase 38 240 - -
Lele21g1686 489 Pfam Phosphoribulokinase / Uridine kinase family 43 225 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1686 Lele-ChrLele21 24818406 24825517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1686 1 480 PRT Gene Family AT3G27190 72.144 0.0 719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1686 21 24818406 24825517 Lele21g1686 21 24818406 24825517 ECH
Lele21g1686 21 24818406 24825517 Lele23g0325 23 2259989 2264978 hybridization