Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1684 ATGGTTTCCACGAGACGTAGCGGATCTCTCTCTGGCAACAATTCCAAAAGATCTTCTTCTTCGGATGATAACCCTCCCTCACCGAAGCGTCAAAAGGCTGAAAATGGTGGTCCGTCGGAGAAACCGAAGCCGGCAGCGGAGAATTCTAAAGAAGTAAGCACCCCTGAGCCGGCGGCTGATCCTGGAGAATGCGATGCTCAGATCGCTGGAGATGGCACTGGTGATGGTCTGACTTCTTGCAAGGGTGATGCTGCGGCGGCTGTCACTGTGGCGCTGCCGATCGGTGATGGGTCTTCGCGGACTTTGGTGGCTGATAAGCCAAGGGGTTCTTTGTCTTCGTGGAATATATATCAGAAGCAAAGTCCAAGTTCTGAGACCTCGGCGCCTTGGTGCAGGCTCCTGTCGCAGTCTGCTCTGAACCCAAATGTTTCCATTTGCACACCCAACTTCACTATTGGTTCCAGTAGAAATTGCCACTTTCCATTGAAGGACCAGACTATAAGTGGAAATCTATGCAAGATTAAGCATACCCAGCGTGAGGGATGTGCTGTAGCCTTGTTAGAGAGTACGGGTAGCAAAGGATCTGTGCTAGTTAATGGGACACTTGTCAAGAAGAACACCAGCTGTGTGCTTAACTCGGGTGATGAAGTGGTCTTTGGTTTGCTGGGAAATCATTCATATATCTTTCAGCAGCTAAATACTGACGTTGCAGTTAAGGGTGCAGAAATTCAGGGTGGTGTAGGGAAATTTCTGCAGCTTGAAAGGAGAACGGGAGACCCCTCAGCTGTTGCTGGGGCTTCCATTCTGGCTTCTCTTTCTAGCTTCAGACAAAAAGATATCTCGAGATGGAAATCTCCGTCTCAGAATACTAATAAAGCTCATCAGGGTACTGATGCCCCTGCTCATTCTGCTCATCATGATAATACAGAAATTGAGTTTGATGATCCGGAAGGCAACTCAGCTCCAAATTTAGAGAGTGATAAAGCAGCTGACGTTGGAGCAAGTGACAATAATCATCCAATGGAATGCGATCCAGATGCTAGCATGGAGGCAGGCAATGTAAAACTTTCTGGGATGACTGATTTCCTAAGGCCTTTCTTCAGGATCTTAGCTCGATCTAGTTGTAAACTGAAATTGAGCAAAAGTATCTTTAAACAGGTATTGGAAGAAAGAAATGGGACGAGGGATATGCTGGCAGTATCAACCTCGGGTATGTCTGTGCGCTGTGCGGTGTTCAAAGAAGATGTCCATGCTGCAATATTGGATGGAAAAGACATAGAAGTGTCATTTGACAACTTCCCATATTATTTAAGTGAGAACACAAAAAATGTCTTGGTTGCAGCTTGCTTTATTCACCTGAAGCACAAGGAACATGCGAAATACACATCAGATCTTACGACTATAAACCCACGTATTTTACTTTCTGGACCTGCAGGGTCGGAAATATATCAGGAGATGCTGGCAAAAGCACTTGCTAATTACTTTGGAGCTAAGTTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCATCAAAGGAAGCAGAGCTACTCAAAGATGGATTTATTGTTGAAAAAACCTGCAGCTGCTCCAAGCAAAGTTCTACAGCCGCCGACCTGGCTAGGAACATGGACCCATCAACTAGTGAAACAGATACACCTAGCCCTTCAAATGTACCTACTTCATATGGTCTTGAATCTCAATCCAAAACTGAGACGGATGCCACACCTTCCACTTCTGGGACAACTAAAAATTGTTTGTTTAAAATAGGTGACAGGGTGAAATATAGCTGCTCATCTTCTGGTGGTTTGTATCAGACATCTTCAAGGGGCCCACCTAATGGAAGTCGGGGGAAAGTTGTCTTATGTTTTGACGATAATCCTTTGTCAAAAATTGGTGTAAGATTTGATAAGCCCATACCTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGGAGGTCAAGGGTTTTTCTGCAATGTTAGTGATCTTCGATTGGAAAACAATGGTGTGGATGAGTTGGACAAATTTCTTATCAACTCATTATTTGAGGTTGTTTATAGTGAGAGCAGAACTGCACCTTTCATTTTGTTCATGAAAGATGCTGAGAAGTCTATTGTAGGAAATGGAGATCCATATTCATTTAAAAGTAGGCTTGAAAAGCTTCCAGACAATGTGGTTGTTATAGGCTCGCATACTCACACTGACAGTCGGAAGGAGAAGTCACATCCAGGGGGTTTGCTTTTTACAAAATTCGGCAGCAATCAGACTGCCCTTCTTGACTTGGCTTTCCCGGATAGTTTTGGAAGATTGCATGAGAGGGGGAAGGAAGTCCCAAAGCCAAACAAAACTTTGACTAAGCTTTTCCCTAATAAAGTTACAGTTCACATGCCACAGGATGAGGCACTTCTAGCATCCTGGAAACAGCAGCTGGATCGAGATGCCGAGACTCTAAAAATCAAAGCAAATTTGCATCACCTGCGCACAGTTTTTAGTCGTTGTGGGATGGAATGTGAAGCATTTGAGACTTTGTGCATTAAAGACCAGGCGCTTACAAATGAAAATGCAGAGAAGATAATTGGTTGGGCTTTAAGCCACCACCTCATGCAGAACCATGAAGCCAATCCTAATTCAAAGCTTGTATTGTCCTGTGAAAGCATCCAGTATGGAATTGGCATCTTGCAGGCCATTCAAAATGAGTCCAAGAGCTTGAAGAAGTCTCTGAAGGATGTTGTAACAGAAAATGAGTTTGAAAAGAGGCTGTTGGCTGATGTAATTCCTCCTAGTGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACGCTGAAGGAGTTAGTGATGCTTCCCTTGCAAAGGCCGGAGCTTTTCTGCAAGGGGCAATTAACCAAGCCTTGCAAGGGTATCTTATTGTTTGGGCCCCCAGGAACAGGAAAGACAATGCTTGCAAAGGCCGTGGCCACTGAAGCTGGTGCTAACTTCATCAACATTTCCATGTCAAGCATTACATCTAAGTGGTTTGGTGAGGGTGAAAAATATGTGAAAGCTGTCTTCTCTCTAGCCAGTAAAATTGCCCCTAGTGTTATATTTGTTGATGAAGTTGACAGCATGTTGGGCAGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGCAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCTTACGTACAAAGGATACTGAGCGAATTCTTGTACTTGCGGCCACTAATAGGCCTTTTGACCTTGATGAGGCCGTCATCCGGAGGCTGCCACGAAGATTGATGGTAAATTTGCCAGATGCTCCAAATAGAGCGAAAATATTGAAAGTTATACTAGCTAAAGAGGACTTATCTCCTGACGTTGACTTTGATGCAATTGCCAGTATGACTGATGGATATTCTGGAAGTGATCTGAAGAATCTTTGCGTGACTGCTGCACATCGTCCAATTAAAGAGATATTAGAGAAGGAAAAAAAGGAGTGTGCGGCTGCTCTAGCAGAAGGCAGACCTCCTCCGGCATTAAGTGGCAGTGCCGATGTCCGGTCTTTAAACATGGAGGATTTTAAAGATGCTCATGAACGGGTATGTGCAAGTGTTTCCTCTGAATCCGTAAATATGACGGAGCTCTTACAATGGAATGAACTATACGGCGAAGGGGGTTCGAGAAGAAAGAAAGCACTCAGCTATTTCATGTGA 3717 0.4431 MVSTRRSGSLSGNNSKRSSSSDDNPPSPKRQKAENGGPSEKPKPAAENSKEVSTPEPAADPGECDAQIAGDGTGDGLTSCKGDAAAAVTVALPIGDGSSRTLVADKPRGSLSSWNIYQKQSPSSETSAPWCRLLSQSALNPNVSICTPNFTIGSSRNCHFPLKDQTISGNLCKIKHTQREGCAVALLESTGSKGSVLVNGTLVKKNTSCVLNSGDEVVFGLLGNHSYIFQQLNTDVAVKGAEIQGGVGKFLQLERRTGDPSAVAGASILASLSSFRQKDISRWKSPSQNTNKAHQGTDAPAHSAHHDNTEIEFDDPEGNSAPNLESDKAADVGASDNNHPMECDPDASMEAGNVKLSGMTDFLRPFFRILARSSCKLKLSKSIFKQVLEERNGTRDMLAVSTSGMSVRCAVFKEDVHAAILDGKDIEVSFDNFPYYLSENTKNVLVAACFIHLKHKEHAKYTSDLTTINPRILLSGPAGSEIYQEMLAKALANYFGAKLLIFDSHLLLGGLSSKEAELLKDGFIVEKTCSCSKQSSTAADLARNMDPSTSETDTPSPSNVPTSYGLESQSKTETDATPSTSGTTKNCLFKIGDRVKYSCSSSGGLYQTSSRGPPNGSRGKVVLCFDDNPLSKIGVRFDKPIPDGVDLGGACEGGQGFFCNVSDLRLENNGVDELDKFLINSLFEVVYSESRTAPFILFMKDAEKSIVGNGDPYSFKSRLEKLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHERGKEVPKPNKTLTKLFPNKVTVHMPQDEALLASWKQQLDRDAETLKIKANLHHLRTVFSRCGMECEAFETLCIKDQALTNENAEKIIGWALSHHLMQNHEANPNSKLVLSCESIQYGIGILQAIQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSPDVDFDAIASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKECAAALAEGRPPPALSGSADVRSLNMEDFKDAHERVCASVSSESVNMTELLQWNELYGEGGSRRKKALSYFM 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1684 1238 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 412 1237 - -
Lele21g1684 1238 CDD FHA 130 230 IPR000253 GO:0005515
Lele21g1684 1238 Pfam FHA domain 151 220 IPR000253 GO:0005515
Lele21g1684 1238 CDD AAA 972 1105 - -
Lele21g1684 1238 MobiDBLite consensus disorder prediction 280 344 - -
Lele21g1684 1238 Gene3D - 129 238 - -
Lele21g1684 1238 Coils Coil 894 914 - -
Lele21g1684 1238 MobiDBLite consensus disorder prediction 299 313 - -
Lele21g1684 1238 MobiDBLite consensus disorder prediction 280 297 - -
Lele21g1684 1238 ProSitePatterns AAA-protein family signature. 1077 1096 IPR003960 GO:0005524|GO:0016887
Lele21g1684 1238 MobiDBLite consensus disorder prediction 540 582 - -
Lele21g1684 1238 Pfam AAA+ lid domain 1127 1162 IPR041569 -
Lele21g1684 1238 Gene3D - 932 1213 IPR027417 -
Lele21g1684 1238 SMART AAA_5 970 1107 IPR003593 -
Lele21g1684 1238 Pfam ATPase family associated with various cellular activities (AAA) 974 1103 IPR003959 GO:0005524|GO:0016887
Lele21g1684 1238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 933 1214 IPR027417 -
Lele21g1684 1238 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 932 1108 - -
Lele21g1684 1238 SUPERFAMILY SMAD/FHA domain 114 228 IPR008984 GO:0005515
Lele21g1684 1238 MobiDBLite consensus disorder prediction 1 70 - -
Lele21g1684 1238 Gene3D - 1106 1200 - -
Lele21g1684 1238 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1684 Lele-ChrLele21 24798488 24808617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1684 933 1185 Calmodulin-binding Proteins AT3G56690 39.615 1.27e-41 164