Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1676 ATGCGCCATTCTCCGCCGTTAATCTCATCTCTTCCCATCAAAACCAGTCACTTGGCTCCGCTCTCACTCTCTCATAGCTCAGAATCAATGGCTTCTCTACGCCATACCACAACCTCACTCCAATTCAACCACTCTCCACTCCCCAGAAACTTCGTATCCCCTAAACCCCTCACCAACCTCTCGTTTTCCGCCTCTACCTTCCCTTCTTCTCTCCAACTCAATCTCGCCGCCGACACTGGCCGCCGCTCCCATGGCGGCGTTCTCGGAGCTAAGATGGTTTCCAGCGCCGCCGCCAGCTACGCCCTCGCTCTCGCCGACGTTGCCAAGGCCAACAACGCCCTCGACTCCACAACCGCCGATGTCGAGAAAATCGAGGAAATCTTCGCCGACCCTGGGGTATTCTCCTTTTTCAACAACCCTACCATAGAAACAGAAAAGAAGAAAAAGGTTGTGGAGGAAATCGCCACTTCCTCCAGCCTGCAGCCTCACACTCAGAACTTCCTCAAGATTTTGGTGGATGCGAAGAGAATCGATCTGATCAATGACATAGCGAAGGAGTATGAGTTTGTGTATAACGATTTGACGGACACGGAGCTTGCGATCGTGAGCTCGGTGGTGAAGCTGGAATCGCAGCACTTGGCTCAGATAGCGAAGCAGGTGCAGAAGCTGACTGGTGCGAAGAATGTGAGAATTAAGACATTGATTGATCCAAGTTTGGTGGCTGGCTTCACAATCAGGTATGGGAATTCGGGATCTAAGTTGATTGATATGAGTGTGAAGAAGCAACTTGAAGAAATTGCTGCTCAGCTTGATTTGGGCGATATCACACTCAATGTATGA 840 0.5071 MRHSPPLISSLPIKTSHLAPLSLSHSSESMASLRHTTTSLQFNHSPLPRNFVSPKPLTNLSFSASTFPSSLQLNLAADTGRRSHGGVLGAKMVSSAAASYALALADVAKANNALDSTTADVEKIEEIFADPGVFSFFNNPTIETEKKKKVVEEIATSSSLQPHTQNFLKILVDAKRIDLINDIAKEYEFVYNDLTDTELAIVSSVVKLESQHLAQIAKQVQKLTGAKNVRIKTLIDPSLVAGFTIRYGNSGSKLIDMSVKKQLEEIAAQLDLGDITLNV 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1676 279 PRINTS ATP synthase delta subunit signature 165 176 IPR000711 GO:0015986|GO:0046933
Lele21g1676 279 PRINTS ATP synthase delta subunit signature 176 190 IPR000711 GO:0015986|GO:0046933
Lele21g1676 279 PRINTS ATP synthase delta subunit signature 227 242 IPR000711 GO:0015986|GO:0046933
Lele21g1676 279 PRINTS ATP synthase delta subunit signature 245 263 IPR000711 GO:0015986|GO:0046933
Lele21g1676 279 PRINTS ATP synthase delta subunit signature 96 115 IPR000711 GO:0015986|GO:0046933
Lele21g1676 279 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 93 195 IPR026015 -
Lele21g1676 279 Gene3D - 96 188 IPR026015 -
Lele21g1676 279 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 97 270 IPR000711 GO:0015986|GO:0046933
Lele21g1676 279 Hamap ATP synthase subunit delta [atpD]. 92 272 IPR000711 GO:0015986|GO:0046933
Lele21g1676 279 Pfam ATP synthase delta (OSCP) subunit 97 270 IPR000711 GO:0015986|GO:0046933
Lele21g1676 279 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 229 248 IPR020781 GO:0015986|GO:0016020|GO:0046933
Lele21g1676 279 Coils Coil 107 127 - -
Lele21g1676 279 PANTHER ATP SYNTHASE DELTA CHAIN 77 271 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1676 Lele-ChrLele21 24735980 24736819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1676 30 277 Primary Pumps ATPases AT4G09650 58.065 7.32e-95 277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1676 21 24735980 24736819 Lele23g0336 23 2347923 2348675 hybridization