Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1668 ATGGAGAATCCCCAGCAAGCCCCACCTTCCTCCCCATACCCACCTCAGCCCCCTGCTCCTCCTTCTTCCTTCCACCACCTTCTTCAACAGCAGCAACTGCAGCTTCACACCTTCTGGAACACCCAGCGCCAAGAGATCGAGCATGTCAACGATTTCAAGAACCACCAGCTCCCTCTCGCTCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCCGCCGAAGCCCCCATTTTGTTCGCCAAGGCCTGCGAGCTTTTCATCCTCGAGCTCACCATTCGATCCTGGCTTCACGCTGAAGAGAACAAGAGGCGCACTCTCCAGAAGAACGACATCGCTGCTTCCATCACACGCACTGATATTTTCGATTTCTTGGTTGATATTGTGCCTAGGGACGAGATCAAGGACGAGGCTGCCCTTGATGGAATGATGGAGGCCCCCACCAGCGGTGTTCCTTACCACTATCCGTCTATGGGCCAACCTGCCGGCCCTCCCGGTGGCATAATTATTGGACGGCCGGCGGTGGATCCCACCGGATTGTACGCGCAACCGCCTTCGCAAGCGTGGCAGTCAGTGTGGCAGACGGCGCCCGATGATGTGTCCTACGGCAGCGGCGGGAGCAGCGGACAGGGCAATCTTGATGGTCAGAGTTGA 663 0.5747 MENPQQAPPSSPYPPQPPAPPSSFHHLLQQQQLQLHTFWNTQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAASITRTDIFDFLVDIVPRDEIKDEAALDGMMEAPTSGVPYHYPSMGQPAGPPGGIIIGRPAVDPTGLYAQPPSQAWQSVWQTAPDDVSYGSGGSSGQGNLDGQS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1668 220 MobiDBLite consensus disorder prediction 1 24 - -
Lele21g1668 220 MobiDBLite consensus disorder prediction 200 220 - -
Lele21g1668 220 Pfam Core histone H2A/H2B/H3/H4 28 117 IPR007125 GO:0003677
Lele21g1668 220 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 30 148 - -
Lele21g1668 220 SUPERFAMILY Histone-fold 25 128 IPR009072 GO:0046982
Lele21g1668 220 MobiDBLite consensus disorder prediction 1 22 - -
Lele21g1668 220 Gene3D Histone, subunit A 22 134 IPR009072 GO:0046982
Lele21g1668 220 FunFam Nuclear transcription factor Y subunit gamma 24 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1668 Lele-ChrLele21 24680412 24683824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1668 22 220 CCAAT-HAP5 Transcription Factor Family AT3G48590 84.878 3.36e-106 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele21g1668 CBFD_NFYB_HMF 7.7e-17 CL0012