Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1649 ATGGACGATGGCTGCCAGCATGAAAATGGTAGGCATAAGGTGGACTATTACAGAGGAGCACATTCTCCGTGGAATATGGTTCCTCAACATCAAGCAAAGGAACCAAATGCCTTAGTTATGAATAAGAAAATCATGTCCATCATAGCTGAAAGGGAGGCTGCTATCCGAGAACGAAATGCGGCTTTATCTGAAAAGAATGAAGCCCTGGCTGCTCGAGATGAGGCCCTTAGGCAGAGGGATGAAGCACTTGTTCAGAGGGATAGTGCCATAATGGAACGGGATAATGCCCTTGCTGCCCTTCAAATCCGGGACAATGCTGTCAACTTCCAATTGGGTAGTGGAATTCAACGCGGGTCAAAGCGAATGCTCCATTCCTCAAACCATCTTGTTGAAATGGCAGAAGCTGCATACAGTACAAAGGATACCAACATAACTGAGGCCTTCCCGGTTACTGTAATAAATTCTGAAGCCGTTAAATCTCATCAGGCAAAGAGAAAAAAGGAAGACAAGGCAAATGCTTCTAAAGCGTTGAAGGGCAGAGGAAAGAAGATGGGTGAGGATTTAAATAGGTCAGCTTCTTCTGAAGGAACTAAAATTAAATCTGAGTGGGATAGACAGGATATTGGCTTGAATTTGGTTACATTTGATGAAACTACCATGCCAGCCCCTGTCTGCACATGCACTGGAGTACCAAGGCAGTGCTACAAATGGGGAAACGGCGGATGGCAGTCATCCTGTTGTACCACCTCCTTGTCAATGTATCCGTTGCCACAGCTTCCAAACAAGCGCCATTCTCGAATCGGCGGCCGGAAGATGAGTGGAAGTGTCTTTACAAGACTGCTCAGTAGGGTAGCAGCAGAAGGGCAAGATTTATCTATACCATTGGATCTCAAGGAATACTGGGCCAGACATGGGACAAATCGCTACATCACGATCAAGTAG 942 0.4607 MDDGCQHENGRHKVDYYRGAHSPWNMVPQHQAKEPNALVMNKKIMSIIAEREAAIRERNAALSEKNEALAARDEALRQRDEALVQRDSAIMERDNALAALQIRDNAVNFQLGSGIQRGSKRMLHSSNHLVEMAEAAYSTKDTNITEAFPVTVINSEAVKSHQAKRKKEDKANASKALKGRGKKMGEDLNRSASSEGTKIKSEWDRQDIGLNLVTFDETTMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTSLSMYPLPQLPNKRHSRIGGRKMSGSVFTRLLSRVAAEGQDLSIPLDLKEYWARHGTNRYITIK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1649 313 Pfam GAGA binding protein-like family 1 313 IPR010409 -
Lele21g1649 313 MobiDBLite consensus disorder prediction 159 189 - -
Lele21g1649 313 MobiDBLite consensus disorder prediction 158 198 - -
Lele21g1649 313 Coils Coil 59 79 - -
Lele21g1649 313 PANTHER - 1 313 IPR010409 -
Lele21g1649 313 SMART GAGA_bind_2 1 313 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1649 Lele-ChrLele21 24501623 24502653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1649 1 313 BBR or BPC Transcription factor family AT2G21240 60.317 3.48e-137 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele21g1649 GAGA_bind 1.3e-100 No_clan