Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1647 ATGAAAGCATCGGAGAACGACATTCTCAACGTCTCCACTCAGCTTCTTTCTTCTCTTCTCGATGAGATTCCCACCGTTGTTAACTTTAAAGGTAAATGGTCTCTAATTAGAGCCAAACTCTTCGATCTTCAGACTCAGCTCACTGATTTCTCCTCTGAGTTTCCTAATTACTCGTCCAATTCTCTCTCACTCGAGCTACTTCAGTCCATTTCCCACTCCCTAAACGATGCCGTTTCGCTTGCAAAAGAATGCCAGTCCACCAACTTATCCCAGGGAAAGCTTAAGACTCAGAGCGACATTGATTCGGTCCTCGCTAAGCTTGATCGCCATGTTAAAGACTGCGAGATTCTGTTCAGGAGTGGGGTTTTGCAGGACGCGGCCGTTTCCAGCGCTTCTAAGAGAGAGGCCGTACGGTCTGAATCCATAAACTTGATTACTCGTCTGCAGATCGGTTCTGCAGAGTCCAGGAGGTCAGCGATGGACTCCTTGTTGAGTTTACTCGAAGAGGACGATAAGAATGTGATGATAGCTGTGGCGCAGGGTGTGGTTCCGGTGCTTGTTCGCTTACTGGATTCAGCCTCTTCCGAGATGAAGGAGATGACTGTTGCTACCATCTCCAGAGTCTCCATGGTGGATGGTAGTAAGCATGTTTTGATTGCTGAAGGTTTGTTGCTTTTGAATCAATTGGTCCGTGTTCTCGATTCGGGGAGTGGATTTGCAAAACAGAAATCCTGCATAGCTCTCCAGGCTCTAAGTTTCTCCAAAGAAAATGCTAGAGCAATGGGGTCTAGAGGTGGAATCTCGTCGCTTTTAGAGATTTGTCAAGCCGGCACTCCTGGTTCCCAAGCTTCGGCAGCAGGGGTTTTAAGAAATCTCTCTGTCTTTCCTGAAATCAGACAGAATTTTATCGAGGAAAACACTATTGATGTTCTATTGGGGCTCGCCTCATCGGGAACTGCGTTAGCGCAAGAAAATGCAATTGGGTGTTTGTCCAATTTAGTTTCTGAAGACGAAAGTTTAAAACTTTTGTTTGTGAAGGAAGGAGGGATCGAGTGCCTGAAGAATTTTTGGGACTCAGCTCCGACAGTTCGGAGTCTTGAGGTTGCAGCTGAGTTGTTGAGTCAACTGGCTTCTAGGTCACCGATTGCTGATGTTCTTGTTTCTGATGGGTTTATACTCCGCCTTGTGGGTGTGTTGAATTGTGGAATTCTAGGGGTGAGAACTGCGGCAGCTCGAGCTGTTTATGCTTTGGGGTTGTACAACACAAAATCGAGGAAGGAGATGGGTGAATGTGGATGTATGACCCCATTGATCGAGATGCTGGATGGCAAAGCTGTAGAAGAGAAAGAAGCAGCTACAAAAGCGTTGTCGGTGCTCATGTTGTATGCGGCCAATAGAAAAATTTTCCGGAAGGATGAGAGGGGTATAGCTTGTGCTGTTCAGCTGCTGGATCCTTCTGTAGTGAATTTGGATAAAAAATATCCTGTTTCAGTGCTGACCTCGCTTGTGCATTCAAAGAAATGCAGGAAACATATGGTGGCGGCCGGTGCTTGTGTATATACGCAGAAACTTGTTGAGATGGATGTTGAAGGTGCCAAGAAACTGTTGGATAGCCTTGGTAGTGGTAAGATATGGGGAGTTTTTGCAAGACCCTAA 1656 0.4626 MKASENDILNVSTQLLSSLLDEIPTVVNFKGKWSLIRAKLFDLQTQLTDFSSEFPNYSSNSLSLELLQSISHSLNDAVSLAKECQSTNLSQGKLKTQSDIDSVLAKLDRHVKDCEILFRSGVLQDAAVSSASKREAVRSESINLITRLQIGSAESRRSAMDSLLSLLEEDDKNVMIAVAQGVVPVLVRLLDSASSEMKEMTVATISRVSMVDGSKHVLIAEGLLLLNQLVRVLDSGSGFAKQKSCIALQALSFSKENARAMGSRGGISSLLEICQAGTPGSQASAAGVLRNLSVFPEIRQNFIEENTIDVLLGLASSGTALAQENAIGCLSNLVSEDESLKLLFVKEGGIECLKNFWDSAPTVRSLEVAAELLSQLASRSPIADVLVSDGFILRLVGVLNCGILGVRTAAARAVYALGLYNTKSRKEMGECGCMTPLIEMLDGKAVEEKEAATKALSVLMLYAANRKIFRKDERGIACAVQLLDPSVVNLDKKYPVSVLTSLVHSKKCRKHMVAAGACVYTQKLVEMDVEGAKKLLDSLGSGKIWGVFARP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1647 551 SUPERFAMILY ARM repeat 144 489 IPR016024 -
Lele21g1647 551 Pfam Armadillo/beta-catenin-like repeat 170 206 IPR000225 GO:0005515
Lele21g1647 551 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 549 - -
Lele21g1647 551 Gene3D - 363 527 IPR011989 -
Lele21g1647 551 SMART arm_5 170 210 IPR000225 GO:0005515
Lele21g1647 551 SMART arm_5 421 461 IPR000225 GO:0005515
Lele21g1647 551 SMART arm_5 337 378 IPR000225 GO:0005515
Lele21g1647 551 SMART arm_5 295 335 IPR000225 GO:0005515
Lele21g1647 551 SMART arm_5 254 294 IPR000225 GO:0005515
Lele21g1647 551 SMART arm_5 379 419 IPR000225 GO:0005515
Lele21g1647 551 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 181 223 IPR000225 GO:0005515
Lele21g1647 551 Gene3D - 122 237 IPR011989 -
Lele21g1647 551 Gene3D - 240 362 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1647 Lele-ChrLele21 24489458 24491113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1647 126 410 U-box Gene Family AT2G23140 27.083 1.35e-15 78.2