Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1641 ATGAACTGGCTGATATGGCGGAAATGGAAGGCCTTGGCCTTGGCCATGGCTATAACGGTGTCGTTTCAGATGAGTATATGCTTGGACTCTCATTCTCTTTCCTCGCTTGGAGATGCCATTCTCAGGCTTCCTGGCCAGCCCCAAGTTCGCTTTAAGCAGTTCTCAGGATACGTTGAAGTCGACGATAAGAATGAGAAGGCTCTGTTCTACTATTTTGTTGAATCGGACACTGATCCTGCTTCCAAGCCTCTGGTTCTCTGGCTCAATGGAGGGCCTGGTTGTTCTTCCTTGGGAGTAGGTGCATTCTCTGAAAATGGGCCTTTCAGACCAAGTGGGGAAGTTCTAATTGAAAACAAGTATAGTTGGAACAAAGAAGCAAATGTACTGTATTTGGAGACACCAGTTGGAGTGGGTTTCTCTTATGCCAAAGGAAGTTCCTCCCATTTCACAGTAAACGACGAGGCAACAGCCAGGGATAACGTTGTATTCCTGATACGCTGGTTTAGCAAATTCCCTCAGTACAGGCACAGAGACTTGTTTCTGACAGGGGAAAGCTATGCAGGGCATTATGTTCCTCAACTTGCAAAGCTCATGATTGAGATGAACAAAAAGGAGAAGAAATTCAATCTTAAAGGCGTAGCTTTGGGTAATCCACTTCTAGAATATGCCACGGATTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGATTGATATCAGATTCAACATACAAAATGTTCACTAAAGTGTGTAATTATTCTCGGTACGTTAGTGAATACTATAGAGACTCAGTTTCGCCTCTTTGTTCGAAGGTTATGCACCAAGTAGGGAGAGAAACCAGTAAATTTGTGGACAAGTACGATGTTACCCTTGATGTTTGCATTTCATCAGTGCTTTCACAGTCGAAAGTTCTTTGTCCTCAAACTGAACAAGCAAATGAGATGGTAGATGTATGCGTAGATGACAAAGTTACAAATTATTTAAACCAAAAAGATGTACGTGAGGCTCTCCATGCCAGGCTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAACATTCTGGACTATGATATGCTCAACCTGGAAGTGCCTACCCTCCCTCTCGTTGAATCGCTGATAAAAGCCGGAGTTCAGGTCTTAATTTACAGTGGAGATCAAGATTCTGTTCTTCCTCTGACTGGTAGCCGCACCTTGGCTCGAAAACTGGCAAGGAAATTAGAACTAAATACAACAGTACCTTACAGAGTATGGTTTGCAGGCCAGCAGGTCGGTGGGTGGACTCAAGTTTATGGAAATATCCTCTCATTTGCCACAGTGAGAGGAGCCTCCCATGAAGTTCCATTCTCACAGCCTGAGAGATCCCTTGTGCTCTTCAAGTCATTCTTGGAAGGCGGGCCTCTACCTGATAGAATCTTGGCGCAAAGATGTCATAGTGAGGTTTCTTTCCCCTTCTTTTCCCCTCTAATGCGTGTTCAAAACAACGACCCTCCCATCATCAACCCTCTTCGACATCAGGGCAAAGACGAAGATAGGGAATTGGAACTTGGATCGGACGAGCCTGAGGCCCCATTGCCTCTCACTGCTACTTCCCGGGTCTTGTATATGTTGGGAGATATCGCGGCAGGGCCTGCGTTTAGGTTTACGCAATGGCTCGAATCGGTTCGTAAACGCACTGCCAGAAATCGCCACTCCGGCTTCCCCAACCGCCTTACGAGGCTTCCCGATGCTATGCCTTCTAGTCCAGAAGGATCAATGGACTATCCTAAATGTCATTCACCTCCCGTGCAAACAACAGAACTTAGTTTGTGGGACAGGCTTGGTTATGCTGCTATGTTGGACATAGAATCTAGCTCTTTTTCTTGGGAGAGGCTATCTTCACTGCATCACACTGAACACAGTAGCAGCACCGAACATTCTGAGGATGAAATGAACAAAGCTCTTGAGGTAACTGTAAATTCTGGGGGAGTTGTCTTCTTTGCCTTCTTTAATCGCCTTGGGAGTGATGATACTTCTCCAAAGGAGGAAGCTGCTGTAATAAAAATATCATCATCAAGAATGGCAACACAATCTGAACGCCTTGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCTCAGGCTAGAGTTATTCACAATACCAGTCCAGAGTGGCTCCAAATAAAGGAAGCTGCAGAAAAAGCTAGAAATAGAGCATTTTCTGAAGGGGATGAATCTGGTGAAATGACTTGTTTAGAACTTTTGGAAGCACTCGAGCTTAGTAGGTGCCTCTTTTGTATGAGTTATATACATGGGTCTCCTTTACTAGAAAGTTCAAGTGCTTTTCAATCTCGGGAATCTGCTGAAAGAACAGCAGCAGCTCTTGGCAGGGTATTGATGCTAGACCTTGTCATCAGAAATGAAGATAGGCTCCCCTGCCGTCAGCTTAGATGGCGTGGTAATTCTGCAAATTTGTTGTTGGCTGAAAAGATGATGTCCGTAACTACTAACTCACTTGAAAAAGCCTTAGATTCTGCCATGAATCAATATAGACCAAGGATGATAAGGGCACTTCAAAAAGAAAGAAGATCAACTTCAGTAGGTATCAGATTGAGTTCTAATAATCCTGGATTGCTTTCACAGGCCTCTGATACCTCAGACATCTCGGAATCACCAAGTTGTAGTGACATGAGCCTTGAAAGTCAAACTAATGGTGAACCACAATATACTGACATTGTGGCTATTGATTCTGGTGTTCCTCGCCGGCCCCCTGCTGGAAAACGTGCAGATGATCAGGCTAATTATCCTAAGTTGGTTGAGTTGCTAATCAATAGTTCTGGGTTTTGCTCTAACCTGTTACATGATATCACTGGAGGAAAATTAGGATCTCCTTCACTAGAAGAGATTAATACAACTACTGATGTATATGCAATTGAGACAGCATCAGTAGTTCATGAGTTCCGTAGTGGTTTCCGTGCTGCTCTTAGAGATCTTCAGGGATTTCATATATTCCTACTTACTCTACACCAAAAGCTTGATAGCTTATTACGGTCATTTATGAACATTATGAGCAAAATATCACCAGGGGAATCTGACAAAGATGATTCAATGGTTCCCGATTCACCTTCACTAAATAATGGAGATGGTATCTGTCCATCTCCAGCAAACAAGGATAGGTCTGTTGTTGAAAACCATCCAGATTATAGTGACTCAGAATCACAAAGAACTGCTCCAAGGGCATCATGGTCAGGGAATAAAGAAAACTCTGATACTGCTTCTCCTATGTCAAGGGAAGGTTGGCATGGAAAGTTCTATAAAGGAGGTGGAGATCCATTACGTAGTAGTCTTCGCTTGACAGCAAAGCTACGCGACTTCCATAAATATGCAAAGGTTGATGCAGAATCTAATAAAGAATTAGAACAGTGGAATGAAACACTTAAAAGCGATGCCATCAAGCTATGCCAGGACAACAATTTCAATACTGGATTTTTTGAGTGCAGTGATAACAACAGTGTTGTTGATGCATATGAACTGAAGGTCAGACTTGAGCACATTCTTGAAAGGATTGCACTAGTCTCTGAGGCTGCAAATACAGAGAAGCCATCTGCTGTTACAAATAGCCTATTCATTGGTGGAGCACTGGCTGCAAGATCTATATACACACTGCAACACTTCGGCATCACGCATATTCTGTGTTTGTGCACCAATGAAATTGGACAGTCAGATTCTCAGTTTCCTGATCTATTTGAGTATAAAAATTTCTATGTTTGTGACGATGTAGATTGTAACATCAGCAGCATATTTGAAGAAGCCTGTGATTTTATAGATCATGTTGAACAGAAAGGCCAGAGAATTTTAGTCCATTGCTTTGAAGGGAGAAGCAGAAGCGTCACGTTGGTCCTTGCTTACTTAATGCTTAGGAAGAAGTTCACTTTATTAAAAGCATGGAATACTCTGAAACGAGTTCATCGTCGAGCTCAACCCAACGACGGCTTTGCAAGGATCTTACAGGAACTGGATAAGAAACTGCATGGAAAGGTCTCCATGGAGTGGCAGCAAAGGAAACCAATGATGAAGGTTTGTCCAATATGTGGAAAAAATGCAGGACTAAGCAGCAGCTCGCTTAAGCTTCATCTGCAGAAATCCCATAAAAAGCTATCATCAGGGAGTGTGGACAGTGCCATGACAATGGAAATCCAGAAGGCTTTAACAGCTTTGAAAATTAGTCGTGGTGGGAGCGTCAGCCCCACGCAAAGGCAGCCTAGTTCAATAGTGGATGAGTGA 4263 0.4342 MNWLIWRKWKALALAMAITVSFQMSICLDSHSLSSLGDAILRLPGQPQVRFKQFSGYVEVDDKNEKALFYYFVESDTDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPSGEVLIENKYSWNKEANVLYLETPVGVGFSYAKGSSSHFTVNDEATARDNVVFLIRWFSKFPQYRHRDLFLTGESYAGHYVPQLAKLMIEMNKKEKKFNLKGVALGNPLLEYATDFNSRAEFFWSHGLISDSTYKMFTKVCNYSRYVSEYYRDSVSPLCSKVMHQVGRETSKFVDKYDVTLDVCISSVLSQSKVLCPQTEQANEMVDVCVDDKVTNYLNQKDVREALHARLVGVRKWDVCSNILDYDMLNLEVPTLPLVESLIKAGVQVLIYSGDQDSVLPLTGSRTLARKLARKLELNTTVPYRVWFAGQQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVLFKSFLEGGPLPDRILAQRCHSEVSFPFFSPLMRVQNNDPPIINPLRHQGKDEDRELELGSDEPEAPLPLTATSRVLYMLGDIAAGPAFRFTQWLESVRKRTARNRHSGFPNRLTRLPDAMPSSPEGSMDYPKCHSPPVQTTELSLWDRLGYAAMLDIESSSFSWERLSSLHHTEHSSSTEHSEDEMNKALEVTVNSGGVVFFAFFNRLGSDDTSPKEEAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTSPEWLQIKEAAEKARNRAFSEGDESGEMTCLELLEALELSRCLFCMSYIHGSPLLESSSAFQSRESAERTAAALGRVLMLDLVIRNEDRLPCRQLRWRGNSANLLLAEKMMSVTTNSLEKALDSAMNQYRPRMIRALQKERRSTSVGIRLSSNNPGLLSQASDTSDISESPSCSDMSLESQTNGEPQYTDIVAIDSGVPRRPPAGKRADDQANYPKLVELLINSSGFCSNLLHDITGGKLGSPSLEEINTTTDVYAIETASVVHEFRSGFRAALRDLQGFHIFLLTLHQKLDSLLRSFMNIMSKISPGESDKDDSMVPDSPSLNNGDGICPSPANKDRSVVENHPDYSDSESQRTAPRASWSGNKENSDTASPMSREGWHGKFYKGGGDPLRSSLRLTAKLRDFHKYAKVDAESNKELEQWNETLKSDAIKLCQDNNFNTGFFECSDNNSVVDAYELKVRLEHILERIALVSEAANTEKPSAVTNSLFIGGALAARSIYTLQHFGITHILCLCTNEIGQSDSQFPDLFEYKNFYVCDDVDCNISSIFEEACDFIDHVEQKGQRILVHCFEGRSRSVTLVLAYLMLRKKFTLLKAWNTLKRVHRRAQPNDGFARILQELDKKLHGKVSMEWQQRKPMMKVCPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRQPSSIVDE 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1641 1420 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 1262 1314 IPR000387 GO:0016311|GO:0016791
Lele21g1641 1420 FunFam Carboxypeptidase 33 468 - -
Lele21g1641 1420 Pfam Actin-fragmin kinase, catalytic 599 878 IPR015275 -
Lele21g1641 1420 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1193 1338 IPR020422 GO:0006470|GO:0008138
Lele21g1641 1420 SMART dsp_5 1193 1335 IPR020422 GO:0006470|GO:0008138
Lele21g1641 1420 SUPERFAMILY Protein kinase-like (PK-like) 550 925 IPR011009 -
Lele21g1641 1420 MobiDBLite consensus disorder prediction 564 592 - -
Lele21g1641 1420 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 514 1418 IPR035010 GO:0004721|GO:0009737|GO:0043622
Lele21g1641 1420 FunFam Dual specificity protein phosphatase PHS1 1165 1339 - -
Lele21g1641 1420 SUPERFAMILY alpha/beta-Hydrolases 43 467 IPR029058 -
Lele21g1641 1420 Gene3D alpha/beta hydrolase 39 469 IPR029058 -
Lele21g1641 1420 Pfam Dual specificity phosphatase, catalytic domain 1208 1333 IPR000340 GO:0008138|GO:0016311
Lele21g1641 1420 MobiDBLite consensus disorder prediction 859 899 - -
Lele21g1641 1420 FunFam Carboxypeptidase 365 464 - -
Lele21g1641 1420 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Lele21g1641 1420 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Lele21g1641 1420 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Lele21g1641 1420 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Lele21g1641 1420 Pfam Serine carboxypeptidase 44 464 IPR001563 GO:0004185|GO:0006508
Lele21g1641 1420 MobiDBLite consensus disorder prediction 498 522 - -
Lele21g1641 1420 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 1193 1338 IPR029021 -
Lele21g1641 1420 ProSitePatterns Serine carboxypeptidases, histidine active site. 434 451 IPR033124 GO:0004185
Lele21g1641 1420 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Lele21g1641 1420 MobiDBLite consensus disorder prediction 1020 1093 - -
Lele21g1641 1420 Gene3D - 767 1018 IPR036940 GO:0016301
Lele21g1641 1420 CDD DSP 1194 1331 - -
Lele21g1641 1420 MobiDBLite consensus disorder prediction 1066 1088 - -
Lele21g1641 1420 Gene3D Protein tyrosine phosphatase superfamily 1175 1348 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1641 Lele-ChrLele21 24386146 24404579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1641 505 1404 Protein tyrosine phosphatase (PTP) family AT5G23720 66.703 0.0 1158