Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1629 ATGGGCAACTGCTTCTCCGACGTTGCCGGTGGGCGCATGGCCATCGGCGGGACCACCGGCTCTCTCCTTAATCCTACCGATGGTCCAAATGATGCTGTTGATAACTTCCTAAAGTATCGGGGCTATCATGGCCTCTACTCTCAGATCGAGTTATCTTTTTCTGCTTCAGGCTTGCGTGACCGGGATGTGCTCTCCAAGAGTGATCCAATGATGGTTCTTTATGCAAAAGGGCAAAGTGGAGCACTTGAGGAACTAGGCCGCACAGAAGTAGTCCTAAATTCTTTGAATCCCTCATGGATCACTAAGCACGCTCTCTTTTACCATTTCGAGGTTGTTCAGGATTTAGTGTTTCGCATATATGATATTGACACCCAGTTTCACAATGTAGACATAAAGATGCTTAAGCTAGAAGAGCAGCAATATCTTGGTGAAGCAACCTGTGCGTTATCTGAGATAATTACAAAACCTGATCGGTCATTGACCTTGGATCTATTCATAGAAGATTCCACTAGATTAAACTACTCTCAGAACTGTGGGAAACTCATGGTGAATGCTGAGGAATGTACCAGTTCGAAGACTACAATAGAGATGATATTCAGGTGTTCAGATTTGGAATATAGGAATCTGTTCTCAAAAAGTGATCCGTTTTTAATGATATCAAAAGTTGTGGAAGGCGGCACCCAAGTTCCTATATGCAAAACAGAAGTTAAAAAAAATGACCACAACCCTATATGGAAGTCAGTATTCTTCAATATTCAACAAGTACGAAGCAAGGACAGCCCATTAATTATAGAATGCTACGACTTCAATAGCAATGGCAAACATGAATTGATGGGGAAAGTGCGTAAATCCTTGATAGAGTTGGAAAAGCTTCATTCAGGTGGTCAAGGAGAAAGTTTATTTTTGTCCACTGCTGATGGAAAAGATAATCATGATAAGGTCTTAAAGAGCCAAATATATGTGGACAAGTATACTGAAAGTGTCCAACACACTTTTCTTGATTACTTAGCTGGGGGATTCGAATTGAACTTCATGGTGGCCATTGATTTCACAGCTTCAAATGGAAACCCACGCCTTCCTGATTCTTTACATTATATGGATCCTTCAGGGCGGCCAAATGCATACCAGAGAGCTATCTTAGAGGTTGGGGAGGTGTTACAGTTCTATGATTCAGACAAACGATTTCCAACGTGGGGCTTTGGCGCTCGACCAATTGATGGTCCTGTCTCCCATTGTTTCAATTTGAATGGAAGCAATCATTACTGTGAGGTGGATGGGATCCAAGGAATTATGATGGCATATACAAGTGCCCTGCTTAATGTTTCTCTTGCAGGGCCAACTCTTTTTGGGCCTATCATAAATAATGCCGCGCTCATTGCCGGTGAATCTGTAGCAAAGGGAAAACGGAAGTACTTTGTTTTATTGATAATCACAGATGGAGTGGTAACAGATCTCCAAGAAACAAAAGATGCTCTTATTAAAGCATCTGATCTGCCATTGTCGCTCCTTATTGTTGGAGTAGGAGGTGCCGACTTCAAAGACATGGAGGTTTTGGATGCTGACAAGGGAGAGAGGCTTGAAAGCTTTTCGGGTCGGGTTGCTTCACGGGATATAGTCCAGTTTGTTCCATTTCGGGATGTTCAAAATGGACAGGTTTCAGTAGTTCAAGCACTTTTAGCAGAATTGCCTACTCAATTTTTATCTTACATGCGGACCAGAAATATTCGACCAAATCTCTAG 1740 0.423 MGNCFSDVAGGRMAIGGTTGSLLNPTDGPNDAVDNFLKYRGYHGLYSQIELSFSASGLRDRDVLSKSDPMMVLYAKGQSGALEELGRTEVVLNSLNPSWITKHALFYHFEVVQDLVFRIYDIDTQFHNVDIKMLKLEEQQYLGEATCALSEIITKPDRSLTLDLFIEDSTRLNYSQNCGKLMVNAEECTSSKTTIEMIFRCSDLEYRNLFSKSDPFLMISKVVEGGTQVPICKTEVKKNDHNPIWKSVFFNIQQVRSKDSPLIIECYDFNSNGKHELMGKVRKSLIELEKLHSGGQGESLFLSTADGKDNHDKVLKSQIYVDKYTESVQHTFLDYLAGGFELNFMVAIDFTASNGNPRLPDSLHYMDPSGRPNAYQRAILEVGEVLQFYDSDKRFPTWGFGARPIDGPVSHCFNLNGSNHYCEVDGIQGIMMAYTSALLNVSLAGPTLFGPIINNAALIAGESVAKGKRKYFVLLIITDGVVTDLQETKDALIKASDLPLSLLIVGVGGADFKDMEVLDADKGERLESFSGRVASRDIVQFVPFRDVQNGQVSVVQALLAELPTQFLSYMRTRNIRPNL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1629 579 Gene3D C2 domain 198 329 IPR035892 -
Lele21g1629 579 Gene3D C2 domain 52 197 IPR035892 -
Lele21g1629 579 FunFam Protein BONZAI 1 isoform A 195 314 - -
Lele21g1629 579 Pfam C2 domain 54 155 IPR000008 -
Lele21g1629 579 Pfam C2 domain 198 294 IPR000008 -
Lele21g1629 579 ProSiteProfiles C2 domain profile. 177 302 IPR000008 -
Lele21g1629 579 Pfam Copine 362 577 IPR010734 -
Lele21g1629 579 SMART VWA_4 341 544 IPR002035 -
Lele21g1629 579 FunFam Protein BONZAI 1 51 194 - -
Lele21g1629 579 ProSiteProfiles C2 domain profile. 29 162 IPR000008 -
Lele21g1629 579 SUPERFAMILY vWA-like 342 524 IPR036465 -
Lele21g1629 579 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 176 288 IPR035892 -
Lele21g1629 579 CDD C2B_Copine 195 290 IPR037768 -
Lele21g1629 579 SMART C2_3c 198 300 IPR000008 -
Lele21g1629 579 SMART C2_3c 48 161 IPR000008 -
Lele21g1629 579 CDD C2A_Copine 47 165 - -
Lele21g1629 579 CDD vWA_copine_like 313 566 IPR010734 -
Lele21g1629 579 PANTHER COPINE 34 578 IPR045052 GO:0005544
Lele21g1629 579 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 164 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1629 Lele-ChrLele21 24247136 24252451 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1629 21 24247136 24252451 Lele23g0382 23 2756837 2767230 hybridization
Lele21g1629 21 24247136 24252451 Lele24g1573 24 21388530 21402927 hybridization