Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1606 ATGAAGAAATCGAGCACATCTACCTGGGTTCTTCCTTATCGGACCCAAATCCTCACAGAGCTTTACACATTGGGCAGAAAATTGGGTCAAGGTCAATTTGGTACTACTTTCCTTTGTACAGAGAAGTCCACGGGTCGCAGATATGCCTGCAAGTCAATTCCGAAGCGCAAGCTCATCTGTAAAGAGGACTACGATGATGTTTGGAGGGAGATTCAGATAATGCACCACTTGTCTGAGCACCTTCACGTGGTTAGAATTCATGGTACCTACGAGGACTATGTTTCTGTTCACTTGGTCATGGAGCTGTGCGAAGGTGGAGAGTTGTTCGATAGGATTGTGCAGAAAGGGCATTACAGTGAGAGGCAAGCGGCCAAGATCATTCGGACCATTGTTGAGGTTGTTGAAGCTTGTCATTCTCTTGGGGTTATGCACAGAGACCTCAAACCAGAGAACTTCTTATTCGATAGCGTCGAAGAAGATGCCAAACTTAAGGCAACTGATTTTGGGCTGTCTGTTTTTTACAAGCCAGGTGAAACATTTTCTGATGTTGTTGGAAGCCCGTACTATGTTGCGCCAGAGGTGTTGCGCAAACATTATGGACCTGAATCAGATGTGTGGAGTGCAGGAGTTATTTTGTACATTTTACTTAGTGGGGTGCCACCATTTTGGGCTGAATCTGAAACAGGGATCTTCCGACAGATTTTGGAAGGAAAAATTGATTTTCAGTCTGAACCATGGCCTAGCATTTCAGACAGTGCAAAGGATCTAATTCAAAAAATGCTCGATCAAAATACCAAAAAAAGGCTTACAGCCCATGAAGTACTTCGTCACCCATGGATTGTTGATGACAGCATTGCACCAGATAAGCCTCTTGATTCTGCTGTTTTGTCACGCTTGAAGCAATTCTCTGCAATGAATAAGCTCAAAAAGATGGCTTTGCGAGTTATAGCTGAGAGGCTCTCTGAGGAAGAAATCGGTGGCCTGAAGGAGTTATTTAAAATGATTGACTCCGACAACAGCGGAAACATAACATTTGATGAGCTCAAAGACGGTTTAAAGCGAGTAGGATCCGATCTTATGGAGTCAGAAATCAAGGATCTTATGGATGCAGCTGATATTGATAATAGTGGGACCATTAGTTATGGTGAATTCATTGCTGCTACTATACACTTGAATAAGCTGGAGAGGGAAGAGAATCTGTTATCAGCTTTCTCCTACTTTGACAAAGATGGAAGTGGCTACATAACTGTTGATGAGATTCAACAGGCTTGTAAAGAGTTTGGTCTTAATGATTTCCATATTGATGAAATAATCAAGGAAATCGATCAAGACAATGATGGGCAAATAGATTATGGGGAATTTGCAGCAATGATGAGAAAGGGGAATGGAGGTGTTGGAAGGAGAACAATGAGGAAGACTTTGAATTTCAGGGATGCTTTTGGATTGATAGGCAAAGGTTCCAATGATTCTCAGCTTTAG 1479 0.4239 MKKSSTSTWVLPYRTQILTELYTLGRKLGQGQFGTTFLCTEKSTGRRYACKSIPKRKLICKEDYDDVWREIQIMHHLSEHLHVVRIHGTYEDYVSVHLVMELCEGGELFDRIVQKGHYSERQAAKIIRTIVEVVEACHSLGVMHRDLKPENFLFDSVEEDAKLKATDFGLSVFYKPGETFSDVVGSPYYVAPEVLRKHYGPESDVWSAGVILYILLSGVPPFWAESETGIFRQILEGKIDFQSEPWPSISDSAKDLIQKMLDQNTKKRLTAHEVLRHPWIVDDSIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDSDNSGNITFDELKDGLKRVGSDLMESEIKDLMDAADIDNSGTISYGEFIAATIHLNKLEREENLLSAFSYFDKDGSGYITVDEIQQACKEFGLNDFHIDEIIKEIDQDNDGQIDYGEFAAMMRKGNGGVGRRTMRKTLNFRDAFGLIGKGSNDSQL 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1606 492 ProSitePatterns EF-hand calcium-binding domain. 336 348 IPR018247 -
Lele21g1606 492 SMART serkin_6 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1606 492 ProSiteProfiles EF-hand calcium-binding domain profile. 433 464 IPR002048 GO:0005509
Lele21g1606 492 CDD STKc_CAMK 22 279 - -
Lele21g1606 492 Pfam EF-hand domain pair 398 459 IPR002048 GO:0005509
Lele21g1606 492 Pfam EF-hand domain pair 328 388 IPR002048 GO:0005509
Lele21g1606 492 FunFam Calcium-dependent protein kinase 1 24 107 - -
Lele21g1606 492 SUPERFAMILY Protein kinase-like (PK-like) 8 298 IPR011009 -
Lele21g1606 492 CDD EFh 328 387 IPR002048 GO:0005509
Lele21g1606 492 ProSiteProfiles Protein kinase domain profile. 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1606 492 Gene3D Transferase(Phosphotransferase) domain 1 108 283 - -
Lele21g1606 492 ProSitePatterns EF-hand calcium-binding domain. 372 384 IPR018247 -
Lele21g1606 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Lele21g1606 492 SUPERFAMILY EF-hand 319 459 IPR011992 -
Lele21g1606 492 SMART efh_1 433 461 IPR002048 GO:0005509
Lele21g1606 492 SMART efh_1 363 391 IPR002048 GO:0005509
Lele21g1606 492 SMART efh_1 327 355 IPR002048 GO:0005509
Lele21g1606 492 SMART efh_1 399 427 IPR002048 GO:0005509
Lele21g1606 492 ProSitePatterns EF-hand calcium-binding domain. 442 454 IPR018247 -
Lele21g1606 492 ProSiteProfiles EF-hand calcium-binding domain profile. 359 394 IPR002048 GO:0005509
Lele21g1606 492 ProSitePatterns Protein kinases ATP-binding region signature. 28 61 IPR017441 GO:0005524
Lele21g1606 492 Pfam Protein kinase domain 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1606 492 FunFam Calcium-dependent protein kinase SK5 393 488 - -
Lele21g1606 492 ProSitePatterns EF-hand calcium-binding domain. 408 420 IPR018247 -
Lele21g1606 492 Gene3D - 393 490 - -
Lele21g1606 492 CDD EFh 400 459 IPR002048 GO:0005509
Lele21g1606 492 FunFam Calcium-dependent protein kinase SK5 108 292 - -
Lele21g1606 492 Gene3D - 284 389 - -
Lele21g1606 492 PANTHER SERINE/THREONINE-PROTEIN KINASE 15 454 - -
Lele21g1606 492 FunFam calcium-dependent protein kinase SK5 317 389 - -
Lele21g1606 492 ProSiteProfiles EF-hand calcium-binding domain profile. 323 358 IPR002048 GO:0005509
Lele21g1606 492 Gene3D Phosphorylase Kinase; domain 1 24 107 - -
Lele21g1606 492 ProSiteProfiles EF-hand calcium-binding domain profile. 395 430 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1606 Lele-ChrLele21 24086425 24090584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1606 7 489 EF-hand Containing Proteins AT1G35670 77.984 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele21g1606 Pkinase 1.2e-77 CL0016