LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele21g1605	ATGGAAGAGCGTGGTCCTTGTAATCAAGGTATGTTCATTGATCAGCACAAGGGATACAAAAGTCAACTCTCATCAAGAATTTCTAGAGATGAGGAAGAGGAAGAGGATTTGAAAGATGAAAATGAAGAAGATTTTAAAATTAAAACTATGTTCACGCCAAAATGTAAGAGAAGAAAGCAGCTTAGCCCTGATCATCTTGGAGAGATGAAAGAACTGTTAGATGGAGAACGGGGGCAAGGTATTAGCAAGCTTAAGACAAAGAAGCGTCAGAATAGAAATAGATGGTCAGCTGAAAGGTATCAGCAGGCTGAGAAAAGAATGTGGGAGATATTAAAGGCTGCGGATGCGAATTTTGCAAACCCAATTTCACGACATGCTCTAAGAGAGCAAGCCCGTCAGGACATTGGTGATACTGGACTTTTAGATCACTTACTGAAGCAAATTGATGGTAAAGTAGCACCTGGAGGGACTGAACGGTTTCGACGGTGGCACAATTCCAAAGGAATTATGGAGTACTGGTTGGAGAGTGCTCACCTAGATAAAATCCGTCGGGATGCTGGGGTGCAGGATCCTTACTGGCTACCACCTAATTTTAGTGCAGGCAATGCCTCCTCTCAGAATACTGATTCTTCTTGTGAACTGAAGTTGCTTCTAATAGAAATGGCCAAAATGAAGAGAGATATGCAGGAGTTAATGTTGAAGAAGCAAGAGAAAAATGAACATAACCTGATGGAAGGGACCCAGAAGGAATCGGTGAAGCTGCAAGCTATGACTGAAGAGCGCTTGACTGGGATTATTACTTCTTTGAAGGGTATGCAGGGAATGTATGGTGAATTGGTCACTTGGAAAACTAAAGTTGATCAACAGCTTGCAGAAATAGCCGATCAATTGAACGATCTTCAGTCACCACAGGAACAAACTACCACGGGTTTTTCCTCAGAAGAATGGGAAGGTTGGCTAGAAAACGTCAACCTAGACAATACTCCGGGAGATGGACTGGCAACTTGGTCAGGTGGTCCGGAACTGCAAGATGTTCAGCTACAGGTTATACTCCATGATCCTATCTTACCCTTGCGATCTCCACCACGCGATAAAGAACCGAATGATGCAACGAGTCATTACCAAGAGACAAGAGGAAGATCACCTGATGTGACTCCTTGTTCGTCCATGATTGTCAGTTCAAAATCAGTTCGACGCAACAACAAATTCATATTAATTCAGGGTATGTTGATGGAGCTGTTTCAATGGAAAGATAAAATCGAGCAGCAGCTTTTGGAGGTATCAAATTCCGTACATATGCTGGTGCCGAAGTATACCACGGCCTGA	1326	0.4306	MEERGPCNQGMFIDQHKGYKSQLSSRISRDEEEEEDLKDENEEDFKIKTMFTPKCKRRKQLSPDHLGEMKELLDGERGQGISKLKTKKRQNRNRWSAERYQQAEKRMWEILKAADANFANPISRHALREQARQDIGDTGLLDHLLKQIDGKVAPGGTERFRRWHNSKGIMEYWLESAHLDKIRRDAGVQDPYWLPPNFSAGNASSQNTDSSCELKLLLIEMAKMKRDMQELMLKKQEKNEHNLMEGTQKESVKLQAMTEERLTGIITSLKGMQGMYGELVTWKTKVDQQLAEIADQLNDLQSPQEQTTTGFSSEEWEGWLENVNLDNTPGDGLATWSGGPELQDVQLQVILHDPILPLRSPPRDKEPNDATSHYQETRGRSPDVTPCSSMIVSSKSVRRNNKFILIQGMLMELFQWKDKIEQQLLEVSNSVHMLVPKYTTA	441

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele21g1605	441	MobiDBLite	consensus disorder prediction	1	45	-	-
	Lele21g1605	441	MobiDBLite	consensus disorder prediction	356	386	-	-
	Lele21g1605	441	Coils	Coil	214	241	-	-
	Lele21g1605	441	MobiDBLite	consensus disorder prediction	358	373	-	-
	Lele21g1605	441	PANTHER	PROTEIN DYAD	9	432	IPR044221	GO:0007131\|GO:0051177\|GO:0051321
	Lele21g1605	441	Coils	Coil	20	40	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele21g1605	Lele-ChrLele21	24080690	24083220	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele21g1605	94	175	PHD Transcription Factor Family	AT5G22260	43.373	1.60e-07	51.6