Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1604 ATGTCAAGTTTTAGAGTAGGTGGCAAGGTGATGGATAAAGTTGATTTATTGAGGAAGAGGCATTGGCCATGGCGCTTGGATGTTTGGCCTTTCGTTATTATATATGCTCTGTGGCCAACAACAATTCTTCCCAGCCTAGACTTTGTGGATGCTGCCATTGTATTGGGTGGCCTTGTAGCTCTTCACATTCTGTTCTGGTTGTTCACGGTTTGGTCTGTTGATTTCAAATCTTTTGCCCATTACAGCAAGGTTAAAAATATTCACGATGCAGATGCATGCAAAATAACACCAGCTCAGTTTTCAGGTTCTAAAGAAGTTGTTCCGCTTAATTTTCGAAAAACGGCTGGAGGTTCTTCATCGCAGTTGGATTCAGAAGAGATTTACTTTGACTTCAGGAAACAACGTTTTGTCTATTCAAAGGAGAATGGAACGTTTTGCAAGCTTTCTTACCCTACCAAGGAAACATTTGGTTATTATCTCAGAAGTACTGGCCATGGCACTGAAGCTAAAGTTCTTGCTGCCAATGAGAAATGGGGGCGCAACGTATTTGATTATCCTCAACCTACCTTTCAGAAATTGTTGAAAGAGAACTGCATGGAGCCTTTTTTTGTATTTCAGGTTTTCTGTGTGGGTCTCTGGTGCTTGGATGAATATTGGTATTACAGTTTGTTTACCCTATTTATGCTGTTTATGTTTGAGTCGACTATGGCAAAAAGCCGGCTGAAGACTTTAACTGAGTTGAGGCGTGTTAGTGTTGATAGTCAGATCTTAATGGCACATCGCTGTGGCAAGTGGGTAAAACTCTCTGGTACTGATCTCTTGCCTGGGGATGTTGTGTCCATTGGACGCTCTTCAGGTCAGAATGGAGAAGAGAAGTCTGTACCTGCAGACATGCTTATATTGGCTGGAAGTGCAATTGTAAATGAAGCAATTCTCACAGGCGAGTCTACTCCTCAGTGGAAGGTTTCAATTGCTGGTAAAGGCATCGAGGAAAAGTTATCAGCAAGGCGAGACAAAAGCCATGTCTTGTTTGGCGGAACTAAAATTTTGCAGCACACTCCTGACAAGACTTTTCCATTGAAAACCCCTGATGGTGGCTGCTTGGCTGTTGTTATAAGAACGGGATTTGAAACTAGCCAAGGAAAGCTGATGCGGACAATCTTATTCTCTACTGGAAGGGTGACTGCCAATAGCTGGGAAAGTGGGCTGTTCATTTTATTCTTGGTCGTGTTTGCTTTAGTAGCTGCTGGTTATGTACTTGTTAAGGGGCTAGAAGATCCCACGAGGAGCAAGTATAAGCTTATATTAAGCTGTTCACTTATTATCACTTCAGTGATACCTCCTGAATTACCCATGGAATTGTCAATAGCGGTTAATACTTCCCTAATTGCACTAGCTCGGCGTGGAATATTTTGCACAGAACCTTTCAGAATACCATTTGCTGGGAAGGTTGACATATGTTGTTTTGACAAGACTGGAACACTTACCTCTGATGACATGGAGTTTTCTGGAGTTGTTGGGGTGGCAGGGTCTACAGAATTAGAGTCTGATGTGAATAGAGTGCCTGCACGTACAGTAGAAATCCTGGCTTCTTGTCATGCATTGGTTTTTGTTGATAATAAGCTGGTCGGCGATCCTCTTGAGAAGGCAGCACTAAAGGGAATAGATTGGAGTTATAAATCTGACGAGAAGGCTGTTACAAAAAAGGGGAATGGCAATCCTGTCCAAATTGTTCAGCGACACCATTTTTCATCTCACTTAAAACGAATGGCAGTTGTTGTTCGCATTCAAGAGGAGTTTTTGGCCTTTGTTAAGGGTGCCCCAGAAATTATTCAAGATAGGCTTACTGATAGACCACCATCATATGTTGAGACCTACAAAAAATATACACGTCAGGGGTCTCGTGTTCTTGCCCTTGCTTATAAGTCTCTTCCTGACATGACAGTCAGTGAAGCTAGAGGCTTGGATAGGGATATAGTGGAGAGCGGGCTTACTTTTGCAGGATTTGTGGTGTTTAATTGTCCTATTAGATCGGATTCAGCCTCAATTTTATCTGAATTGAAAGGATCATCGCATGACCTGGTTATGATCACTGGTGATCAAGCTTTGACAGCTTGCCATGTTGCTGGTCAAGTTCATATAATATCAAAACCGACATTAATTCTTGGTCCAGCAAGTAATGGCGAAGGGTATAACTGGATGTCTCCTGATGAGTCTGAAATAGTCCCCTACAGTGTGAAAGAGGTTGAATCTTTATCAGAGAGTCGTGATCTCTGCATTGGAGGTGATTGCATTGAGATGTTGCAACAAACTTCTGCTAGTCTACTGGTCATTCCATACGTGAAGGTGTTTGCTAGAGTGGCTCCTGAACAGAAAGAACTTATCATGACCACTTTTAAAAAAGTAGGAAGGATAACTTTGATGTGTGGAGATGGTACAAATGATGTTGGAGCTTTGAAGCAGGCCCATGTAGGGGTTGCTCTTCTGAATGCGACACCTCCAACTCAAAGTGGAAGCTCCTCTTCAGACTCGTCTAAGGAAGATGGTACAAAATCTAACAAGCCAAAGAAATCTAAGTCTGCACTCGATTCATCTGGAAAACCTGTTGGCTCTAGCGGAGAAGGCACTTCAAAGGCCAAAGGTGCTTCACGATCAGATTCCATTAGCCACTCGAGTAACCGTCATGTGACAGCTGCAGAAATGCAAAGACAGAAGCTTAAGAAAATGATGGATGAGCTTAATGAGGAAGGAGATGGTCGTACTGCTCCCACAGTAAAGCTCGGTGATGCCTCAATGGCATCACCTTTCACTGCAAAGCATGCATCTGTTGCTCCCACCACTGACATAATTCGTCAAGGTCGCAGTACTCTTGTGACTACCCTCCAGATGTTCAAAATTCTTGGCCTTAACTGCCTTGCTACTGCATATGTGTTGAGTGTCATGTACCTGGATGGAGTCAAGCTTGGTGATATACAAGCCACGATTAGCGGGGTGTTTACTGCTGCCTTCTTCCTTTTCATCTCACACGCCCGCCCTCTTCCCACGCTCTCAGCTGAACGTCCTCACCCCAATGTCTTTTGTGCTTATGTCTTGCTTTCTCTCCTAGGACAATTTGCAATTCACCTGTTTTTTCTGATTTCTTCGGTTAAAGAGGCTGAGAAACACATGCCCGAGGAATGCATCGAAGTAGATTCTGATTTTCATCCCAACCTGGTGAATACCGTTTCCTACATGGTGAGCATGATGCTTCAGGTGGCCACTTTTGCTGTGAACTATATGGGCCATCCTTTCAACCAGAGCATCTCAGAAAATAAACCATTCCGGTATGCTCTCTTTGCCGCGGCCGTCTTCTTCACAGTGATCACATCGGATCTCTTCAGAGACTTGAATGACTGGCTGAAGCTGGTGCCACTGCCAGAGGGATTAAGGGATAAACTGTTGCTTTGGGCTGCTCTTATGTTTTTGGCGTGCTATTCATGGGAGAGACTATTAAGGTGGGCTTTCCCTGGTAAAATTCCAGCTTGGAGGAAGCGTCAACGTATTACTGCATCTGGCTTTGAAAAGAAGAAACAGGTCTGA 3579 0.4367 MSSFRVGGKVMDKVDLLRKRHWPWRLDVWPFVIIYALWPTTILPSLDFVDAAIVLGGLVALHILFWLFTVWSVDFKSFAHYSKVKNIHDADACKITPAQFSGSKEVVPLNFRKTAGGSSSQLDSEEIYFDFRKQRFVYSKENGTFCKLSYPTKETFGYYLRSTGHGTEAKVLAANEKWGRNVFDYPQPTFQKLLKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVSVDSQILMAHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEEKSVPADMLILAGSAIVNEAILTGESTPQWKVSIAGKGIEEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVIRTGFETSQGKLMRTILFSTGRVTANSWESGLFILFLVVFALVAAGYVLVKGLEDPTRSKYKLILSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGVAGSTELESDVNRVPARTVEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAVTKKGNGNPVQIVQRHHFSSHLKRMAVVVRIQEEFLAFVKGAPEIIQDRLTDRPPSYVETYKKYTRQGSRVLALAYKSLPDMTVSEARGLDRDIVESGLTFAGFVVFNCPIRSDSASILSELKGSSHDLVMITGDQALTACHVAGQVHIISKPTLILGPASNGEGYNWMSPDESEIVPYSVKEVESLSESRDLCIGGDCIEMLQQTSASLLVIPYVKVFARVAPEQKELIMTTFKKVGRITLMCGDGTNDVGALKQAHVGVALLNATPPTQSGSSSSDSSKEDGTKSNKPKKSKSALDSSGKPVGSSGEGTSKAKGASRSDSISHSSNRHVTAAEMQRQKLKKMMDELNEEGDGRTAPTVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAERPHPNVFCAYVLLSLLGQFAIHLFFLISSVKEAEKHMPEECIEVDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENKPFRYALFAAAVFFTVITSDLFRDLNDWLKLVPLPEGLRDKLLLWAALMFLACYSWERLLRWAFPGKIPAWRKRQRITASGFEKKKQV 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1604 1192 Pfam Cation transport ATPase (P-type) 540 616 - -
Lele21g1604 1192 FunFam Cation-transporting ATPase 669 844 - -
Lele21g1604 1192 MobiDBLite consensus disorder prediction 831 846 - -
Lele21g1604 1192 FunFam Cation-transporting ATPase 484 668 - -
Lele21g1604 1192 SUPERFAMILY Calcium ATPase, transduction domain A 258 387 IPR008250 -
Lele21g1604 1192 Gene3D - 224 388 - -
Lele21g1604 1192 Gene3D - 483 668 IPR023299 GO:0000166
Lele21g1604 1192 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Lele21g1604 1192 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Lele21g1604 1192 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Lele21g1604 1192 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Lele21g1604 1192 Pfam E1-E2 ATPase 261 468 - -
Lele21g1604 1192 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Lele21g1604 1192 Coils Coil 1186 1192 - -
Lele21g1604 1192 MobiDBLite consensus disorder prediction 847 861 - -
Lele21g1604 1192 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Lele21g1604 1192 SUPERFAMILY HAD-like 483 836 IPR036412 -
Lele21g1604 1192 Gene3D - 669 845 IPR023214 -
Lele21g1604 1192 PANTHER CATION-TRANSPORTING ATPASE-RELATED 12 1168 - -
Lele21g1604 1192 SFLD Haloacid Dehalogenase 469 955 - -
Lele21g1604 1192 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 45 1149 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Lele21g1604 1192 FunFam Cation-transporting ATPase 226 388 - -
Lele21g1604 1192 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 403 508 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g1604 1192 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 781 828 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g1604 1192 SUPERFAMILY Calcium ATPase, transmembrane domain M 161 1169 IPR023298 -
Lele21g1604 1192 CDD P-type_ATPase_cation 170 1107 - -
Lele21g1604 1192 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166
Lele21g1604 1192 MobiDBLite consensus disorder prediction 864 899 - -
Lele21g1604 1192 Coils Coil 896 916 - -
Lele21g1604 1192 MobiDBLite consensus disorder prediction 831 902 - -
Lele21g1604 1192 SFLD p-type atpase 469 955 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1604 Lele-ChrLele21 24068576 24078040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1604 1 1192 Primary Pumps ATPases AT5G23630 77.722 0.0 1912