Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1600 ATGGGCCGATCTCCTTGCTGCGAAAAACAACACACCAACAAAGGCGCTTGGACCAAAGAAGAAGACCAACGCCTCATCAACTACATCTCCCTCCACGGCCAAGGCTCCTGGCGTTCCCTCCCCAAAGCCGCCGGTTTGCTAAGATGTGGGAAAAGTTGCAGGCTCAGATGGATTAACTATCTAAGACCTGATCTTAAGAGAGGCAATTTTACTGAGGACGAAGACGACCTTATCATTAATCTTCACAGCTTACTCGGAAACAAGTGGTCTCTGATAGCAGCTAGGTTACCCGGTCGAACCGATAATGAGATCAAGAACTACTGGAACACACACATCAAGCGTAAACTCTACAGCCTTGGAATCGACCCTTTAACGCACCGTCCACTTACCTCCGCCGCCGCAGCAACCACTACCACCACCACCACTCCGGCGATCGGCGGTAACAAGAGAAGTATCACTAACGACAAGAATAACCCTAAACTGAAGCTAGTCTCATCATCAGGGGAAGATTCAAACAGTAATAGCAGCAGTGGGATTACAACAGACGAATCAGACAATTCTGATAATCATCATCATCATCAACAACAACTCAACTTGGAGCTCTCCATAGGACTTCCTTCTTTCTCTAACGACGATAAAACCCTCGTCGTTCCCCCCTCAGACAACTTAAAAGGGCAAGGAAGACGTGAGGAAGAAGAAGAAGTGTGTTTGTGTTGCAGTTTAGGGTTTCAGATCGTCGTTGGTGGAGGTAATAATCAAGCATGTAGGTGCAAAGCGATGAGGAATAGTATTTGTTCAGTAATTACTACTGCACCAACTTCTTCTACTGCTGCATCAGACGATAACGTTTTCAGATTTTCCATCACCTCCTTCAATTGTTAG 882 0.4626 MGRSPCCEKQHTNKGAWTKEEDQRLINYISLHGQGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEDEDDLIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSLGIDPLTHRPLTSAAAATTTTTTTPAIGGNKRSITNDKNNPKLKLVSSSGEDSNSNSSSGITTDESDNSDNHHHHQQQLNLELSIGLPSFSNDDKTLVVPPSDNLKGQGRREEEEEVCLCCSLGFQIVVGGGNNQACRCKAMRNSICSVITTAPTSSTAASDDNVFRFSITSFNC 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1600 293 MobiDBLite consensus disorder prediction 132 197 - -
Lele21g1600 293 Gene3D - 69 116 - -
Lele21g1600 293 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele21g1600 293 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele21g1600 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele21g1600 293 MobiDBLite consensus disorder prediction 132 183 - -
Lele21g1600 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele21g1600 293 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele21g1600 293 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 195 - -
Lele21g1600 293 FunFam Transcription factor MYB39 69 130 - -
Lele21g1600 293 SMART sant 13 63 IPR001005 -
Lele21g1600 293 SMART sant 66 114 IPR001005 -
Lele21g1600 293 FunFam MYB-related transcription factor 13 66 - -
Lele21g1600 293 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele21g1600 293 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele21g1600 293 CDD SANT 16 61 IPR001005 -
Lele21g1600 293 Gene3D - 14 66 - -
Lele21g1600 293 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1600 Lele-ChrLele21 24032750 24033976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1600 1 286 MYB Transcription Factor Family AT4G38620 53.472 6.45e-90 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele21g1600 Myb_DNA-binding 1e-14 CL0123