Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1599 ATGAGAAGTCTCGTACTTATAAATTGTATAAGGCTTGTGAAAGAGGTTAACTTGATGGCAACAAATGTGCATGGTGAAGATGCCTGTCGTGGAGGCCTTGAGCCACCTCACCTGACTCGCGTTGGCTATGGAGTTCTCTTCGTCTTGCTTCTTCTTTTAGCTTCTGAAGGGATGGCGACGGAGACCCAGGCCATATGGAGACACAAATGCCGGGTACCCAGCAAAAGGTTCAAAGGCCCATGCGTGAGAAACCTCAACTGCGTAAGTGTCTGCAAATCCGAAGGTCACGACTTCGGCGAGTGTGAAGGTCTCCGCCGCCGCTGTCTTTGTTCTGTCCCTTGCTGA 345 0.5072 MRSLVLINCIRLVKEVNLMATNVHGEDACRGGLEPPHLTRVGYGVLFVLLLLLASEGMATETQAIWRHKCRVPSKRFKGPCVRNLNCVSVCKSEGHDFGECEGLRRRCLCSVPC 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1599 114 Pfam Gamma-thionin family 70 114 - -
Lele21g1599 114 PANTHER DEFENSIN-LIKE PROTEIN 1 46 110 - -
Lele21g1599 114 SUPERFAMILY Scorpion toxin-like 69 114 IPR036574 -
Lele21g1599 114 SMART gth_4 69 114 IPR003614 GO:0006952
Lele21g1599 114 Gene3D - 67 114 IPR036574 -
Lele21g1599 114 PRINTS Purothionin signature 99 113 IPR008176 GO:0006952
Lele21g1599 114 PRINTS Purothionin signature 69 84 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1599 Lele-ChrLele21 24025600 24026239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1599 40 114 Plant Defensins Gene Families AT1G61070 37.333 9.07e-14 59.7